RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 HIPK4Q8NE63 616 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 SLC2A14Q8TDB8 520 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 UPF1Q92900 1129 aaKnown RBP eCLIP7.43□□□□□ -1.223e-6■■■■■ 37
KDM3B-207ENST00000510866 SMYD3Q9H7B4 428 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 TFR2Q9UP52 801 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 VCLP18206 1134 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 GLRA2P23416 452 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 ITGA8P53708 1063 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 CDH8P55286 799 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 POLE2P56282 527 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 CCZ1BP86790 482 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 CCZ1P86791 482 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-207ENST00000510866 EVX2Q03828 476 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 JAMLQ86YT9 394 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 MAP4K3Q8IVH8 894 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 ARHGEF19Q8IW93 802 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 KIAA0319LQ8IZA0 1049 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 IL31RAQ8NI17 732 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 SENP8Q96LD8 212 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 CNPY3Q9BT09 278 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 NT5MQ9NPB1 228 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 ADGRA2Q96PE1 1338 aa7.43□□□□□ -1.22
KDM3B-207ENST00000510866 MAFO75444 373 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 KCNJ1P48048 391 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 WASHC5Q12768 1159 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 PDCLQ13371 301 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 UGT3A1Q6NUS8 523 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CCDC149Q6ZUS6 474 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 C11orf96Q7Z7L8 435 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ILDR1Q86SU0 546 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TMEM86AQ8N2M4 240 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SLAIN1Q8ND83 568 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 C9orf72Q96LT7 481 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ZSWIM1Q9BR11 485 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SRP72O76094 671 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 MYL2P10916 166 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 COILP38432 576 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ARFIP2P53365 341 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 PTK7Q13308 1070 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TAF11Q15544 211 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 LONRF1Q17RB8 773 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 FNDC3BQ53EP0 1204 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 HIPK3Q9H422 1215 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ST3GAL5Q9UNP4 418 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ASTN2O75129 1339 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TARSL2A2RTX5 802 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 MMP3P08254 477 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CRYBB1P53674 252 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CCDC92Q53HC0 331 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 C3orf62Q6ZUJ4 267 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 C16orf59Q7L2K0 433 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TFAP2DQ7Z6R9 452 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 PPTC7Q8NI37 304 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ARL8AQ96BM9 186 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ADA2Q9NZK5 511 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 PSMC3IPQ9P2W1 217 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TRMT6Q9UJA5 497 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SLC39A10Q9ULF5 831 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 RRM1P23921 792 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ITGA7Q13683 1181 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TFDP3Q5H9I0 405 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TTC39BQ5VTQ0 682 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CENPPQ6IPU0 288 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 LGI2Q8N0V4 545 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ABRAQ8N0Z2 381 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 COG1Q8WTW3 980 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CEP19Q96LK0 163 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 MTMR9Q96QG7 549 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 FICDQ9BVA6 458 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 KCNMB3Q9NPA1 279 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 VPS9D1Q9Y2B5 631 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 HES2Q9Y543 173 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SF3B1O75533 1304 aaKnown RBP eCLIP7.42□□□□□ -1.221e-6■■■■■ 142.9
KDM3B-207ENST00000510866 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 USP17L7P0C7H9 530 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 EEF1DP29692 281 aaKnown RBP7.42□□□□□ -1.22
KDM3B-207ENST00000510866 TRADDQ15628 312 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 ERMARDQ5T6L9 678 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 STAMBPL1Q96FJ0 436 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 CCDC138Q96M89 665 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SERPINB11Q96P15 392 aa7.42□□□□□ -1.22
KDM3B-207ENST00000510866 SMAPO00193 183 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 SERPINI2O75830 405 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 MAGEA4P43358 317 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
KDM3B-207ENST00000510866 SKOR1P84550 965 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 TTLL9Q3SXZ7 439 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 SGO1Q5FBB7 561 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
KDM3B-207ENST00000510866 TEX12Q9BXU0 123 aa7.41□□□□□ -1.22
KDM3B-207ENST00000510866 ADGRE3Q9BY15 652 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms