RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 NEUROG3Q9Y4Z2 214 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 RALGAPA1Q6GYQ0 2036 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 TSC2P49815 1807 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 SPAARA0A1B0GVQ0 90 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 A8MXQ7 604 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 UPK3BL1B0FP48 263 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 UPK3BL2E5RIL1 263 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 CLDN5O00501 218 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 AP5Z1O43299 807 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 COCHO43405 550 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 RTN3O95197 1032 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 DLATP10515 647 aaKnown RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 TNNI1P19237 187 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 ITPKAP23677 461 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 CACNA2D1P54289 1103 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 TNNC1P63316 161 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 SIM1P81133 766 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 CEBPZQ03701 1054 aaKnown RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 GFPT1Q06210 699 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 SEMA3BQ13214 749 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 COL9A2Q14055 689 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 WDR72Q3MJ13 1102 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 TRMT11Q7Z4G4 463 aaKnown RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 PIP4P1Q86T03 277 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 DEFB119Q8N690 84 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 NAT16Q8N8M0 369 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 OVCA2Q8WZ82 227 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 FBXO32Q969P5 355 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 GTPBP2Q9BX10 602 aaKnown RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 ZNF518BQ9C0D4 1074 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 ZDHHC4Q9NPG8 344 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 DEC1Q9P2X7 70 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 SH3BP1Q9Y3L3 701 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
DDX41-211ENST00000510171 MORC2Q9Y6X9 1032 aaPredicted RBP11.07□□□□□ -0.64
DDX41-211ENST00000510171 CFAP47Q6ZTR5 3102 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 A0A087X0B3 334 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 H0Y626 953 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 HOXC11O43248 304 aaPredicted RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 TULP3O75386 442 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 TRIM16O95361 564 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 SERPINF2P08697 491 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 RPL6Q02878 288 aaKnown RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 TRPC3Q13507 836 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 PSMD6Q15008 389 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 RABEPKQ7Z6M1 372 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 ETFBKMTQ8IXQ9 262 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 PHTF2Q8N3S3 785 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 ZNF513Q8N8E2 541 aaPredicted RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 B3GALNT2Q8NCR0 500 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 GLIS3Q8NEA6 775 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 HPS3Q969F9 1004 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 SPHK2Q9NRA0 654 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 TMEM30AQ9NV96 361 aa11.06□□□□□ -0.64
DDX41-211ENST00000510171 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 KIF26AQ9ULI4 1882 aaPredicted RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
DDX41-211ENST00000510171 STX6O43752 255 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 OPHN1O60890 802 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
DDX41-211ENST00000510171 GABRG2P18507 467 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 NTSR1P30989 418 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ATICP31939 592 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 HOXD13P35453 343 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ZNF33AQ06730 810 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 SLC39A14Q15043 492 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ANO4Q32M45 955 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 SNX30Q5VWJ9 437 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 BBS7Q8IWZ6 715 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 PDILTQ8N807 584 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 SCAMP5Q8TAC9 235 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 ZFRQ96KR1 1074 aaKnown RBP11.05□□□□□ -0.64
DDX41-211ENST00000510171 KCNK16Q96T55 309 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 CGRRF1Q99675 332 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 DUSP9Q99956 384 aaKnown RBP11.05□□□□□ -0.64
DDX41-211ENST00000510171 NACA2Q9H009 215 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 TNMDQ9H2S6 317 aa11.05□□□□□ -0.64
DDX41-211ENST00000510171 AGPAT3Q9NRZ7 376 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms