RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
PRDM16-205ENST00000509860 NDUFV1P49821 464 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 TRIP13Q15645 432 aaPredicted RBP13.07□□□□□ -0.32
PRDM16-205ENST00000509860 CCDC105Q8IYK2 499 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 RNF169Q8NCN4 708 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 TMEM209Q96SK2 561 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 MIS12Q9H081 205 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 RAB17Q9H0T7 212 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 SYNCQ9H7C4 482 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 MYO16Q9Y6X6 1858 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 ZSCAN5DPP0CG00 497 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 SETSIPP0DME0 302 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
PRDM16-205ENST00000509860 GDF10P55107 478 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 HLTFQ14527 1009 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRDM16-205ENST00000509860 FAM71BQ8TC56 605 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 HAUS1Q96CS2 278 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 TMLHEQ9NVH6 421 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
PRDM16-205ENST00000509860 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
PRDM16-205ENST00000509860 C9IYK1 514 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 SHBGP04278 402 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 FYNP06241 537 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PTPN1P18031 435 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PCK1P35558 622 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PLTPP55058 493 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 SLC35B2Q8TB61 432 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 NBNO60934 754 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 ECEL1O95672 775 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 BRCC3P46736 316 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 BCAT1P54687 386 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 ZNF844Q08AG5 666 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DPYSL3Q14195 570 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 ZC3H12AQ5D1E8 599 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DRICH1Q6PGQ1 229 aaPredicted RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 SMOQ99835 787 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 CNPY3Q9BT09 278 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DUSP16Q9BY84 665 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 MTMR10Q9NXD2 777 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PLAAQ9Y263 795 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 HUS1O60921 280 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 CABYRO75952 493 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DDHD2O94830 711 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 NRLP54845 237 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 COPS2P61201 443 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 CRIPAKQ8N1N5 446 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 OR10T2Q8NGX3 314 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 HASPINQ8TF76 798 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 PCED1BQ96HM7 432 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 FMO2Q99518 471 aa13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DDX43Q9NXZ2 648 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
PRDM16-205ENST00000509860 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
PRDM16-205ENST00000509860 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
PRDM16-205ENST00000509860 LCP1P13796 627 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 CDO1Q16878 200 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 DNAJC14Q6Y2X3 702 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-205ENST00000509860 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 I6L893 689 aaPredicted RBP13.05□□□□□ -0.32
PRDM16-205ENST00000509860 MNAT1P51948 309 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 FAM189BP81408 668 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 ATP11AP98196 1134 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 HSP90B2PQ58FF3 399 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 NPNTQ6UXI9 565 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 LRRTM3Q86VH5 581 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 PQLC3Q8N755 202 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 HSPH1Q92598 858 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 ANLNQ9NQW6 1124 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 TMPRSS4Q9NRS4 437 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 SLC38A7Q9NVC3 462 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 M0QZQ0 153 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 GNRH1P01148 92 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 GRK4P32298 578 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 ACAP1Q15027 740 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 FAM172AQ8WUF8 416 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms