RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CACNA1EQ15878 2313 aa16.94■□□□□ 0.3
RAB40C-202ENST00000509637 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 TRIM66O15016 1216 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 KAT7O95251 611 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 TNNI1P19237 187 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 NOVA1P51513 510 aaKnown RBP16.93■□□□□ 0.3
RAB40C-202ENST00000509637 ASIC1P78348 528 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 MRPS21P82921 87 aaKnown RBP16.93■□□□□ 0.3
RAB40C-202ENST00000509637 KDSRQ06136 332 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 MAPRE1Q15691 268 aaKnown RBP16.93■□□□□ 0.3
RAB40C-202ENST00000509637 USP39Q53GS9 565 aaKnown RBP16.93■□□□□ 0.3
RAB40C-202ENST00000509637 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
RAB40C-202ENST00000509637 TTC30AQ86WT1 665 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 TMEFF1Q8IYR6 380 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 B3GALNT2Q8NCR0 500 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 PNKPQ96T60 521 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 CD248Q9HCU0 757 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 ADAMTS9Q9P2N4 1935 aa16.93■□□□□ 0.3
RAB40C-202ENST00000509637 SPTLC2O15270 562 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 STX6O43752 255 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 STAU1O95793 577 aaKnown RBP16.92■□□□□ 0.3
RAB40C-202ENST00000509637 C4BPAP04003 597 aaKnown RBP16.92■□□□□ 0.3
RAB40C-202ENST00000509637 FAM163BP0C2L3 166 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 ZDHHC11BP0C7U3 371 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 MBL2P11226 248 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-202ENST00000509637 ANXA13P27216 316 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 DHPSP49366 369 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-202ENST00000509637 ORC1Q13415 861 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 STK38Q15208 465 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 ARMCX6Q7L4S7 300 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 TMEM25Q86YD3 366 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 BBS7Q8IWZ6 715 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 FUKQ8N0W3 1084 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 NUP93Q8N1F7 819 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 DEFB119Q8N690 84 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 PIGKQ92643 395 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 SMOQ99835 787 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 KIAA1586Q9HCI6 787 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 SLC39A2Q9NP94 309 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 HMGXB4Q9UGU5 601 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 PLXND1Q9Y4D7 1925 aa16.92■□□□□ 0.3
RAB40C-202ENST00000509637 FAM92AA1XBS5 289 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-202ENST00000509637 A8MXQ7 604 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 KLRC4O43908 158 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 PPP6R2O75170 966 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 YWHAQP27348 245 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 DLG4P78352 724 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 CUL4BQ13620 913 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 BMT2Q1RMZ1 405 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 C1orf220Q5T0J3 134 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-202ENST00000509637 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 UNC13DQ70J99 1090 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 FAM35AQ86V20 835 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-202ENST00000509637 ERLEC1Q96DZ1 483 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
RAB40C-202ENST00000509637 ACOX2Q99424 681 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 CD93Q9NPY3 652 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 ARHGEF4Q9NR80 690 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 OSER1Q9NX31 292 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 GMIPQ9P107 970 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 CHD6Q8TD26 2715 aa16.91■□□□□ 0.3
RAB40C-202ENST00000509637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-202ENST00000509637 KHNYNO15037 678 aaKnown RBP16.9■□□□□ 0.3
RAB40C-202ENST00000509637 TBX18O95935 607 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 PROS1P07225 676 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 ADH5P11766 374 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 WASP42768 502 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 PPP3CCP48454 512 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 ZNF252P-AS1Q0IIN9 211 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 GPRIN1Q7Z2K8 1008 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 CYP2U1Q7Z449 544 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 C12orf56Q8IXR9 622 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 DEFB124Q8NES8 71 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 PARD3BQ8TEW8 1205 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 FBXO32Q969P5 355 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-202ENST00000509637 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
RAB40C-202ENST00000509637 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 ATXN2Q99700 1313 aaKnown RBP16.9■□□□□ 0.3
RAB40C-202ENST00000509637 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
RAB40C-202ENST00000509637 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 E2F8A0AVK6 867 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
RAB40C-202ENST00000509637 TULP3O75386 442 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 APODP05090 189 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 CCDC130P13994 396 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 GABRG2P18507 467 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 ITPKAP23677 461 aa16.89■□□□□ 0.29
RAB40C-202ENST00000509637 EIF2DP41214 584 aaKnown RBP16.89■□□□□ 0.29
RAB40C-202ENST00000509637 GRIA2P42262 883 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms