RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 RBM41Q96IZ5 413 aaKnown RBP13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 PCDHB5Q9Y5E4 795 aa13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.29
LYSMD3-204ENST00000509384 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 GLI1P08151 1106 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 KRT7P08729 469 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 CYP2F1P24903 491 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 MIPP30301 263 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 GRIK1P39086 918 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 CETN2P41208 172 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 PTPN9P43378 593 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 NDUFV1P49821 464 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 ARPP19P56211 112 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 ATP11AP98196 1134 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 MLLT1Q03111 559 aaPredicted RBP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 CDO1Q16878 200 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 USP41Q3LFD5 358 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 TAS1R1Q7RTX1 841 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 ADAT2Q7Z6V5 191 aaKnown RBP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 ARFGAP1Q8N6T3 406 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 EXD1Q8NHP7 514 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 TMEM169Q96HH4 297 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 NCAPGQ9BPX3 1015 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 KLHL11Q9NVR0 708 aa13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.2□□□□□ -0.3
LYSMD3-204ENST00000509384 CCDC188H7C350 402 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 EFEMP2O95967 443 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 ZBED1O96006 694 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 DAOAP59103 153 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 TXNRD3NBQ6F5E7 133 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 KIAA1841Q6NSI8 718 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 C8orf74Q6P047 294 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 RNF168Q8IYW5 571 aaPredicted RBP13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 NDRG1Q92597 394 aaKnown RBP13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 KRT12Q99456 494 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 USP18Q9UMW8 372 aa13.19□□□□□ -0.3
LYSMD3-204ENST00000509384 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TRIM66O15016 1216 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PRPSAP2O60256 369 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 IL1R2P27930 398 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 MATKP42679 507 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 MAGEA11P43364 429 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 RGS19P49795 217 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC5A3P53794 718 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 CBX1P83916 185 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 GPR17Q13304 367 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 BRD3Q15059 726 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PSMD5Q16401 504 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SMTNL2Q2TAL5 461 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 ATP13A4Q4VNC1 1196 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 TMEM240Q5SV17 173 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 KLHL7Q8IXQ5 586 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SCML4Q8N228 414 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SPPL2BQ8TCT7 592 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 MAIP1Q8WWC4 291 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 SLC2A13Q96QE2 648 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 HTATIP2Q9BUP3 242 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
LYSMD3-204ENST00000509384 ANKZF1Q9H8Y5 726 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms