RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PRDM4Q9UKN5 801 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 DSEQ9UL01 958 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 ST3GAL5Q9UNP4 418 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 PTCH2Q9Y6C5 1203 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 CASP8AP2Q9UKL3 1982 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 TMEM88BA6NKF7 163 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 E7EVH7 732 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 EBAG9O00559 213 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CYB561D2O14569 222 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 PTGESO14684 152 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 APOL1O14791 398 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 SPTLC1O15269 473 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ALOX15BO15296 676 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ADAMTS4O75173 837 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 DAB1O75553 588 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FAM107AO95990 144 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 GNRH1P01148 92 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 SHBGP04278 402 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 NPR3P17342 541 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 PTPN1P18031 435 aaKnown RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 HOXD10P28358 340 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 PCSK1P29120 753 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 HPDP32754 393 aaPredicted RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 PHBP35232 272 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CHKAP35790 457 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 MATKP42679 507 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 MAGEA4P43358 317 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FLT3LGP49771 235 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 RGS7P49802 495 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ZNF135P52742 658 aaPredicted RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 HNRNPH2P55795 449 aaKnown RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 ARL4CP56559 192 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 EIF3EP60228 445 aaKnown RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 ROR1Q01973 937 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 MGAT3Q09327 533 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 NOGQ13253 232 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 PTK7Q13308 1070 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 LLGL1Q15334 1064 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 TRIP13Q15645 432 aaPredicted RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 DPYSL2Q16555 572 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FAM26DQ5JW98 314 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ERMARDQ5T6L9 678 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 SLC9A4Q6AI14 798 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CYP4V2Q6ZWL3 525 aaPredicted RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 SMC1BQ8NDV3 1235 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 KLHDC9Q8NEP7 349 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FAM172AQ8WUF8 416 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 HSPH1Q92598 858 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 TMEM121Q9BTD3 319 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 TRIM62Q9BVG3 475 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CFHR5Q9BXR6 569 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CALN1Q9BXU9 219 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 RNF39Q9H2S5 420 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CCDC134Q9H6E4 229 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FAM49BQ9NUQ9 324 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.65□□□□□ -0.86
HTT-205ENST00000509043 NINJ2Q9NZG7 142 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 KLK14Q9P0G3 267 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 SENP1Q9P0U3 644 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 PAK5Q9P286 719 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 CDH9Q9ULB4 789 aa9.65□□□□□ -0.86
HTT-205ENST00000509043 ABT1Q9ULW3 272 aaKnown RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
HTT-205ENST00000509043 SF3B1O75533 1304 aaKnown RBP eCLIP9.64□□□□□ -0.87
HTT-205ENST00000509043 TLDC2A0PJX2 215 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 BCLAF3A2AJT9 711 aaKnown RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 NDUFAB1O14561 156 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 INPPL1O15357 1258 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 TRAPPC3O43617 180 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SPAG6O75602 509 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 PDGFRBP09619 1106 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 RBP3P10745 1247 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 FGFR1P11362 822 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 ATP2A2P16615 1042 aaKnown RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 BCAR1P56945 870 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SOX4Q06945 474 aaPredicted RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 MAPRE1Q15691 268 aaKnown RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 HIF1AQ16665 826 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 KYNUQ16719 465 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SMTNL2Q2TAL5 461 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SLC25A52Q3SY17 297 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 KCNT1Q5JUK3 1230 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 CXCL17Q6UXB2 119 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 CDKL3Q8IVW4 592 aaPredicted RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 SCUBE3Q8IX30 993 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SCML4Q8N228 414 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 ARRDC4Q8NCT1 418 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 PRCCQ92733 491 aaPredicted RBP9.64□□□□□ -0.87
HTT-205ENST00000509043 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
HTT-205ENST00000509043 PEBP4Q96S96 227 aa9.64□□□□□ -0.87
HTT-205ENST00000509043 SLC9A7Q96T83 725 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms