RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 DNM3Q9UQ16 869 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 CCL26Q9Y258 94 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 LUC7L2Q9Y383 392 aaKnown RBP6.5□□□□□ -1.37
SSBP2-211ENST00000509013 ADGRG1Q9Y653 693 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 F5P12259 2224 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 ARID2Q68CP9 1835 aa6.5□□□□□ -1.37
SSBP2-211ENST00000509013 ZFYVE26Q68DK2 2539 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 WDFY3Q8IZQ1 3526 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 NPHP3-ACAD11A0A0J9YXS1 232 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 A0A1W2PQC6 194 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PATE3B3GLJ2 98 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CLDN3O15551 220 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 XPOTO43592 962 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 HYAL3O43820 417 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 KIF5CO60282 957 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 KIF20AO95235 890 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CXCL8P10145 99 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ODC1P11926 461 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ARSAP15289 507 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TRIM21P19474 475 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TYMPP19971 482 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 DDX6P26196 483 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 GJA4P35212 333 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 MATR3P43243 847 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 DHPSP49366 369 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 AARSP49588 968 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CDR1P51861 262 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 IRX4P78413 519 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 LRRC63Q05C16 580 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 MCL1Q07820 350 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 BFSP1Q12934 665 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PDGFRLQ15198 375 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ZBTB6Q15916 424 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PROX2Q3B8N5 592 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 MGAT5BQ3V5L5 792 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CCDC40Q4G0X9 1142 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 SLC39A12Q504Y0 691 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PMS2CLQ68D20 193 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 NAIF1Q69YI7 327 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TRIM65Q6PJ69 517 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PDCL2Q8N4E4 241 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ZNF397Q8NF99 534 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TSTD1Q8NFU3 115 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ZNF507Q8TCN5 953 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ANKRD7Q92527 254 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 PIGKQ92643 395 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 USP13Q92995 863 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CD101Q93033 1021 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ACDQ96AP0 544 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 DNAJC19Q96DA6 116 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ARID3AQ99856 593 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 NUSAP1Q9BXS6 441 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TPSD1Q9BZJ3 242 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 KIF9Q9HAQ2 790 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 IL21Q9HBE4 155 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 LZTFL1Q9NQ48 299 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ABHD10Q9NUJ1 306 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TDP1Q9NUW8 608 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 RABGEF1Q9UJ41 708 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CAPN11Q9UMQ6 739 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 UBQLN1Q9UMX0 589 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 MSRB2Q9Y3D2 182 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 NEUROG3Q9Y4Z2 214 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 V9GYY5 206 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 DSPP15924 2871 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 ITPR1Q14643 2758 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 AKAP13Q12802 2813 aa6.49□□□□□ -1.37
SSBP2-211ENST00000509013 CNOT1A5YKK6 2376 aaKnown RBP6.49□□□□□ -1.37
SSBP2-211ENST00000509013 TTC26A0AVF1 554 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 SFI1A8K8P3 1242 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 LACTBL1A8MY62 500 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 RNF225M0QZC1 329 aaPredicted RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 TAF4O00268 1085 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 PPEF2O14830 753 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 TBCAO75347 108 aaKnown RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 CLTAP09496 248 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 ATF6P18850 670 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 BCKDHBP21953 392 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 FECHP22830 423 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 PAX3P23760 479 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 NMT1P30419 496 aaKnown RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 RDXP35241 583 aaKnown RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 GUCY2FP51841 1108 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 SMTNP53814 917 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 LILRA4P59901 499 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 FKBP3Q00688 224 aaKnown RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 LMAN2Q12907 356 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 NAA30Q147X3 362 aaPredicted RBP6.48□□□□□ -1.37
SSBP2-211ENST00000509013 MAN2A1Q16706 1144 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 VWA3BQ502W6 1294 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 TRIM61Q5EBN2 209 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 ZNF569Q5MCW4 686 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 TXNDC8Q6A555 127 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 RINT1Q6NUQ1 792 aa6.48□□□□□ -1.37
SSBP2-211ENST00000509013 ZPBP2Q6X784 338 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms