RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TIAL1Q01085 375 aaKnown RBP eCLIP6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 RHDQ02161 417 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 ZNF750Q32MQ0 723 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 NEK8Q86SG6 692 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 SIRT6Q8N6T7 355 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 CTHRC1Q96CG8 243 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 MSLNLQ96KJ4 702 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 ASB2Q96Q27 587 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 VN1R3Q9BXE9 311 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 SLC29A3Q9BZD2 475 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 CHST8Q9H2A9 424 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 DHX36Q9H2U1 1008 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 ZNF287Q9HBT7 754 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 RNF7Q9UBF6 113 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 AMFRQ9UKV5 643 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 ZNF804BA4D1E1 1349 aa6.42□□□□□ -1.38
TOPBP1-206ENST00000508524 PPP6CO00743 305 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 FGAP02671 866 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 TUBB4AP04350 444 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 TXNP10599 105 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 MYCLP12524 364 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ACVR2AP27037 513 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 EPHA3P29320 983 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ZNF81P51508 661 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ITGA8P53708 1063 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 SEMA5AQ13591 1074 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ARHGEF7Q14155 803 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 MTX3Q5HYI7 312 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 PAPD7Q5XG87 772 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ZNF626Q68DY1 528 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 CATSPERGQ6ZRH7 1159 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 BCDIN3DQ7Z5W3 292 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 YTHDF3Q7Z739 585 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 C8orf58Q8NAV2 365 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 MMS19Q96T76 1030 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 SH2D3AQ9BRG2 576 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 QTRT1Q9BXR0 403 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 PRDM11Q9NQV5 511 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 ASIC5Q9NY37 505 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 MID2Q9UJV3 735 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 HDAC9Q9UKV0 1011 aa6.41□□□□□ -1.38
TOPBP1-206ENST00000508524 TCRBV5S1A1TA0A578 114 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 PSMD9O00233 223 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 RGS10O43665 173 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 MGEA5O60502 916 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 HGFP14210 728 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 KELP23276 732 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 TIRAPP58753 221 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 SLC29A2Q14542 456 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 SUPT20HL1Q3ZLR7 823 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 ZBTB45Q96K62 511 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 LPAR3Q9UBY5 353 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 USP22Q9UPT9 525 aa6.4□□□□□ -1.38
TOPBP1-206ENST00000508524 POC1B-GALNT4F8VUJ3 575 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 M0R3H8 397 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 AGPSO00116 658 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 RAB27BO00194 218 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 CES2O00748 559 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 SPRY2O43597 315 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 PIAS2O75928 621 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 CPT1AP50416 773 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 ALDH5A1P51649 535 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 SLC18B1Q6NT16 456 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 PTCHD4Q6ZW05 846 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 RAB11FIP4Q86YS3 637 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 GALNT4Q8N4A0 578 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 SMG7Q92540 1137 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 DKK4Q9UBT3 224 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 PCDHGB6Q9Y5F9 930 aa6.39□□□□□ -1.39
TOPBP1-206ENST00000508524 CHRM5P08912 532 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 ATF3P18847 181 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 SFPQP23246 707 aaKnown RBP eCLIP6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 MTHFSP49914 203 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 LMAN2Q12907 356 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 ZNF425Q6IV72 752 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 WDR75Q8IWA0 830 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 GALNT16Q8N428 558 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 BTBD1Q9H0C5 482 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 BTBD3Q9Y2F9 522 aa6.38□□□□□ -1.39
TOPBP1-206ENST00000508524 F8W8V4 182 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 USP1O94782 785 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 CYP2A6P11509 494 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 BTF3P20290 206 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 CARSP49589 748 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 DIO1P49895 249 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 PGDP52209 483 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 KLF9Q13886 244 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 MORN5Q5VZ52 161 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 SERPINA13PQ6UXR4 307 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 YAF2Q8IY57 180 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 SCARB1Q8WTV0 552 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
TOPBP1-206ENST00000508524 FAM83DQ9H4H8 585 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms