RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 DEFB123Q8N688 67 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 C7orf31Q8N865 590 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 SREK1Q8WXA9 508 aaKnown RBP5.14□□□□□ -1.59
NUP54-206ENST00000508465 ZBTB10Q96DT7 871 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 ZNF274Q96GC6 653 aaPredicted RBP5.14□□□□□ -1.59
NUP54-206ENST00000508465 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
NUP54-206ENST00000508465 INPP4AQ96PE3 977 aaPredicted RBP5.14□□□□□ -1.59
NUP54-206ENST00000508465 CTAGE1Q96RT6 745 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 MXRA8Q9BRK3 442 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 C16orf70Q9BSU1 422 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 WNT8AQ9H1J5 351 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 OR10A5Q9H207 317 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 RNPEPQ9H4A4 650 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 ARHGEF4Q9NR80 690 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 SETD4Q9NVD3 440 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 KCNJ14Q9UNX9 436 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 UBIAD1Q9Y5Z9 338 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 CHD7Q9P2D1 2997 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 FRMPD4Q14CM0 1322 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 MROH7Q68CQ1 1323 aa5.14□□□□□ -1.59
NUP54-206ENST00000508465 MYH7BA7E2Y1 1941 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 A0A1W2PPC1 479 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 A0A1W2PRX2 142 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 FAM86B1E9PN63 330 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 DDX39AO00148 427 aaKnown RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 HAS3O00219 553 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 MAN2B1O00754 1011 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 CPLX1O14810 134 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 WNT9AO14904 365 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 FIBPO43427 364 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 EDIL3O43854 480 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 PFKFB2O60825 505 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 STAM2O75886 525 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 LARGE1O95461 756 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 CTDNEP1O95476 244 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 FOSP01100 380 aaPredicted RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 LGALS2P05162 132 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 FAM86B2P0C5J1 330 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 SUPT20HL2P0C7V6 817 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 SMIM10L2AP0DMW4 78 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 SMIM10L2BP0DMW5 78 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 KCNA2P16389 499 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 NAT1P18440 290 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 KRT15P19012 456 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 MARK3P27448 753 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 ICAM3P32942 547 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 RABGGTBP53611 331 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 PPIGQ13427 754 aaKnown RBP eCLIP5.13□□□□□ -1.59
NUP54-206ENST00000508465 MTMR1Q13613 665 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 RIN1Q13671 783 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 NEDD9Q14511 834 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 GPNMBQ14956 572 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 CRY1Q16526 586 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 TCTN1Q2MV58 587 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 LRIT3Q3SXY7 679 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 CEP55Q53EZ4 464 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 XRRA1Q6P2D8 792 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 NFRKBQ6P4R8 1299 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 METTL7BQ6UX53 244 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 TRMT1LQ7Z2T5 733 aaKnown RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 PTRH1Q86Y79 214 aaKnown RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 RABGGTAQ92696 567 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 HAS1Q92839 578 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 GLG1Q92896 1179 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 LPPQ93052 612 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 GJA10Q969M2 543 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 MIEF2Q96C03 454 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 DRC1Q96MC2 740 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 ANO3Q9BYT9 981 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 FTOQ9C0B1 505 aaKnown RBP eCLIP5.13□□□□□ -1.59
NUP54-206ENST00000508465 SLKQ9H2G2 1235 aaPredicted RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 AGO3Q9H9G7 860 aaKnown RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 AGO4Q9HCK5 861 aaKnown RBP5.13□□□□□ -1.59
NUP54-206ENST00000508465 C6orf50Q9HD87 102 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 IL23AQ9NPF7 189 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 KCNH7Q9NS40 1196 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 UCKL1Q9NWZ5 548 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 SH3BP1Q9Y3L3 701 aa5.13□□□□□ -1.59
NUP54-206ENST00000508465 EPB41L2O43491 1005 aaKnown RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 JAK2O60674 1132 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 CLASP2O75122 1294 aaKnown RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 CCNE2O96020 404 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 F2P00734 622 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 IQCF3P0C7M6 154 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 CKBP12277 381 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 MYOGP15173 224 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 MC4RP32245 332 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 TCF7P36402 384 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 SREBF1P36956 1147 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 THPOP40225 353 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 RCAN1P53805 252 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 ACTR2P61160 394 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 IGBP1P78318 339 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 HNRNPA0Q13151 305 aaKnown RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 ITGB3BPQ13352 177 aaPredicted RBP5.12□□□□□ -1.59
NUP54-206ENST00000508465 ME3Q16798 604 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 DDR2Q16832 855 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 PRR16Q569H4 304 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 ZNF618Q5T7W0 954 aa5.12□□□□□ -1.59
NUP54-206ENST00000508465 KANK2Q63ZY3 851 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms