RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 COL20A1Q9P218 1284 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 KLHL3Q9UH77 587 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ZNF214Q9UL59 606 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 AGTPBP1Q9UPW5 1226 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 N6AMT1Q9Y5N5 214 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 POTEMA6NI47 508 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ANKRD63C9JTQ0 380 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 FAM86B1E9PN63 330 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 DDX39AO00148 427 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 KMOO15229 486 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ALOX15BO15296 676 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CHMP2AO43633 222 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 EDIL3O43854 480 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ESRRBO95718 433 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 FAM86B2P0C5J1 330 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 PABPC1P11940 636 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CDH3P22223 829 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CA8P35219 290 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 HNRNPFP52597 415 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 PHKG1Q16816 387 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CCDC142Q17RM4 750 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ARHGEF16Q5VV41 709 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 FAAH2Q6GMR7 532 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CCDC137Q6PK04 289 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CENPUQ71F23 418 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 TRMT1LQ7Z2T5 733 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 ZNF467Q7Z7K2 595 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 SRRM1Q8IYB3 904 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CPSF7Q8N684 471 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 FAM161BQ96MY7 647 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 RANBP9Q96S59 729 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 CCDC77Q9BR77 488 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 GPATCH1Q9BRR8 931 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 SYT11Q9BT88 431 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 SLC2A11Q9BYW1 496 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 VTA1Q9NP79 307 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 RRN3Q9NYV6 651 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 SLC7A8Q9UHI5 535 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 PCDHA12Q9UN75 941 aa6.39□□□□□ -1.39
KDM3B-204ENST00000507996 FARP1Q9Y4F1 1045 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 RBBP6Q7Z6E9 1792 aaKnown RBP6.39□□□□□ -1.39
KDM3B-204ENST00000507996 NFASCO94856 1347 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 TRIM64CA6NLI5 447 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PDHXO00330 501 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 DKC1O60832 514 aaKnown RBP eCLIP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 OCM2P0CE71 109 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 OCMP0CE72 109 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PLCG1P19174 1290 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 IVDP26440 423 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 GCAP28676 217 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ATP6V0D1P61421 351 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ASIC1P78348 528 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 CTAG1AP78358 180 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 COG7P83436 770 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 MYBPC1Q00872 1141 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 CALCOCO2Q13137 446 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ORC2Q13416 577 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PTK6Q13882 451 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 E2F2Q14209 437 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 TLR1Q15399 786 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 VPS36Q86VN1 386 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 UHMK1Q8TAS1 419 aaKnown RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 SYTL5Q8TDW5 730 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PRPF31Q8WWY3 499 aaKnown RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 RMDN3Q96TC7 470 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 MFRPQ9BY79 579 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 R3HDMLQ9H3Y0 253 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 TXNRD2Q9NNW7 524 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 HEY2Q9UBP5 337 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 FETUBQ9UGM5 382 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 KCNH4Q9UQ05 1017 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PHIPQ8WWQ0 1821 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 RGS13O14921 159 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PFDN6O15212 129 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 SLC22A1O15245 554 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ADCY6O43306 1168 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 AQP9O43315 295 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 DNAJA2O60884 412 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 RSL1D1O76021 490 aaKnown RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 FDX1P10109 184 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 FGFR1P11362 822 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 HMOX2P30519 316 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 MAN1A1P33908 653 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 GSSP48637 474 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 HSPA13P48723 471 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ENTPD1P49961 510 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 HSD17B4P51659 736 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 GTF2A2P52657 109 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 NCKAP1LP55160 1127 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 FKBP3Q00688 224 aaKnown RBP6.38□□□□□ -1.39
KDM3B-204ENST00000507996 LBX2Q6XYB7 198 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 CABP7Q86V35 215 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 CHSY1Q86X52 802 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 TICAM1Q8IUC6 712 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 GPIHBP1Q8IV16 184 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 SLC7A5P1Q8MH63 180 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 PCYOX1LQ8NBM8 494 aa6.38□□□□□ -1.39
KDM3B-204ENST00000507996 ICA1LQ8NDH6 482 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms