RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 FAM153CQ494X1 144 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 RAB41Q5JT25 222 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 SH3PXD2AQ5TCZ1 1133 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 OVOS1Q6IE37 1185 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 VSIG1Q86XK7 387 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 DDX42Q86XP3 938 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDX41-207ENST00000507900 ATL2Q8NHH9 583 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 HASPINQ8TF76 798 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 ATG4AQ8WYN0 398 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 MYLPFQ96A32 169 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 ACSF2Q96CM8 615 aaPredicted RBP17.36■□□□□ 0.37
DDX41-207ENST00000507900 SMOQ99835 787 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 DDX23Q9BUQ8 820 aaKnown RBP17.36■□□□□ 0.37
DDX41-207ENST00000507900 FRMD8P1Q9BZ68 369 aaPredicted RBP17.36■□□□□ 0.37
DDX41-207ENST00000507900 FAM153AQ9UHL3 310 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 PCDHB7Q9Y5E2 793 aa17.36■□□□□ 0.37
DDX41-207ENST00000507900 FNDC1Q4ZHG4 1894 aaPredicted RBP17.35■□□□□ 0.37
DDX41-207ENST00000507900 PRPSAP2O60256 369 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 DAB1O75553 588 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 AP1G2O75843 785 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 FBXO21O94952 628 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 KCNJ1P48048 391 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 MRPS5P82675 430 aaKnown RBP17.35■□□□□ 0.37
DDX41-207ENST00000507900 PTK6Q13882 451 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 BOLA3Q53S33 107 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 KCNT1Q5JUK3 1230 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 BBS12Q6ZW61 710 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 THEM5Q8N1Q8 247 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 ZMIZ2Q8NF64 920 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 FAM172AQ8WUF8 416 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 GDAP1L1Q96MZ0 367 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 NEUROG2Q9H2A3 272 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 DPH5Q9H2P9 285 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 HIPK3Q9H422 1215 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 LRRC4Q9HBW1 653 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 ZDHHC18Q9NUE0 388 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 PCSK1NQ9UHG2 260 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 NEU2Q9Y3R4 380 aa17.35■□□□□ 0.37
DDX41-207ENST00000507900 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 DCDC2CA8MYV0 355 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 HHLA1C9JL84 531 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 F8W810 466 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 MDM4O15151 490 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 HOXA2O43364 376 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 GAS8O95995 478 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 HSPA9P38646 679 aaKnown RBP17.34■□□□□ 0.37
DDX41-207ENST00000507900 HDAC4P56524 1084 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 MAP3K7CLP57077 242 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 FAAP100Q0VG06 881 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 STRADAQ7RTN6 431 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 OR10T2Q8NGX3 314 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 NKD2Q969F2 451 aaPredicted RBP17.34■□□□□ 0.37
DDX41-207ENST00000507900 ZNF333Q96JL9 665 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 CASD1Q96PB1 797 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 NGRNQ9NPE2 291 aaKnown RBP17.34■□□□□ 0.37
DDX41-207ENST00000507900 CNGB3Q9NQW8 809 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDX41-207ENST00000507900 GRHL1Q9NZI5 618 aa17.34■□□□□ 0.37
DDX41-207ENST00000507900 VWA8A3KMH1 1905 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 ZNF487B1APH4 448 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 LIASO43766 372 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 OAZ2O95190 189 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 MATKP42679 507 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 RPL21P46778 160 aaKnown RBP17.33■□□□□ 0.37
DDX41-207ENST00000507900 ATP11AP98196 1134 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 LMNB2Q03252 620 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 KRT17Q04695 432 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 YWHAHQ04917 246 aaPredicted RBP17.33■□□□□ 0.37
DDX41-207ENST00000507900 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.37
DDX41-207ENST00000507900 GPS2Q13227 327 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 SNX1Q13596 522 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 PDK2Q15119 407 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 CDO1Q16878 200 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 TCTN1Q2MV58 587 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 RAB6CQ53S08 254 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 KAZNQ674X7 775 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 ZDHHC24Q6UX98 284 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 BNIPLQ7Z465 357 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 ABI1Q8IZP0 508 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 SIX6OS1Q8N1H7 587 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 SCML4Q8N228 414 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 TTC13Q8NBP0 860 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 KCTD6Q8NC69 237 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 NT5C3BQ969T7 300 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 FAM193BQ96PV7 902 aaPredicted RBP17.33■□□□□ 0.37
DDX41-207ENST00000507900 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 RAB6CQ9H0N0 254 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 PNPLA8Q9NP80 782 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 TMEM30AQ9NV96 361 aa17.33■□□□□ 0.37
DDX41-207ENST00000507900 DRG1Q9Y295 367 aaKnown RBP17.33■□□□□ 0.37
DDX41-207ENST00000507900 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.32■□□□□ 0.36
DDX41-207ENST00000507900 SYN3O14994 580 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 TRAPPC3O43617 180 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 TKTL1P51854 596 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
DDX41-207ENST00000507900 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 TSPY1Q01534 308 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
DDX41-207ENST00000507900 TSEN2Q8NCE0 465 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms