RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ZNF132P52740 706 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 SLC44A4Q53GD3 710 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 HECTD3Q5T447 861 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 LCLAT1Q6UWP7 414 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 PIGZQ86VD9 579 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 TTC30AQ86WT1 665 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 SLC22A12Q96S37 553 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 BPIFA3Q9BQP9 254 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 TBC1D17Q9HA65 648 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 TRPV5Q9NQA5 729 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 ARHGAP26Q9UNA1 814 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 SCML2Q9UQR0 700 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 CCL26Q9Y258 94 aa20.38■□□□□ 0.85
LMNA-221ENST00000506981 M0QYV0 167 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 RNF225M0QZC1 329 aaPredicted RBP20.37■□□□□ 0.85
LMNA-221ENST00000506981 OAS1P00973 400 aaKnown RBP20.37■□□□□ 0.85
LMNA-221ENST00000506981 MBL2P11226 248 aaPredicted RBP20.37■□□□□ 0.85
LMNA-221ENST00000506981 TUBP50607 506 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 KIF11P52732 1056 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 PDE4CQ08493 712 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 USP4Q13107 963 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 CNGA2Q16280 664 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 SNX30Q5VWJ9 437 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 SMYD5Q6GMV2 418 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 TPRG1Q6ZUI0 275 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 DDX42Q86XP3 938 aaKnown RBP eCLIP20.37■□□□□ 0.85
LMNA-221ENST00000506981 UBA3Q8TBC4 463 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 LSM14BQ9BX40 385 aaKnown RBP20.37■□□□□ 0.85
LMNA-221ENST00000506981 LRRC4Q9HBW1 653 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 HEBP1Q9NRV9 189 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 DNAJC12Q9UKB3 198 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.37■□□□□ 0.85
LMNA-221ENST00000506981 CNTN6Q9UQ52 1028 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 HCN4Q9Y3Q4 1203 aa20.37■□□□□ 0.85
LMNA-221ENST00000506981 BECN2A8MW95 431 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 CYP26A1O43174 497 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 ZDHHC11BP0C7U3 371 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 GNA15P30679 374 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 ZNF165P49910 485 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 KPNA1P52294 538 aaPredicted RBP20.36■□□□□ 0.85
LMNA-221ENST00000506981 COPB1P53618 953 aaKnown RBP20.36■□□□□ 0.85
LMNA-221ENST00000506981 SLC7A9P82251 487 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 APBA1Q02410 837 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 MTF1Q14872 753 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 ASTLQ6HA08 431 aaPredicted RBP20.36■□□□□ 0.85
LMNA-221ENST00000506981 CCDC186Q7Z3E2 898 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 SH3RF2Q8TEC5 729 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 TFAP2BQ92481 460 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 SHC3Q92529 594 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 ZFYVE19Q96K21 471 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 LRRC3BQ96PB8 259 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 SIX2Q9NPC8 291 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 CPQQ9Y646 472 aa20.36■□□□□ 0.85
LMNA-221ENST00000506981 THAP12O43422 761 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 OLFM2O95897 454 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 TCF3P15923 654 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 PLA2G4AP47712 749 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 IFNAR2P48551 515 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 PSEN1P49768 467 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 CLCN5P51795 746 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 TKTL1P51854 596 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 STARD6P59095 220 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 RAPGEF1Q13905 1077 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 NCAPHQ15003 741 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 ZNF77Q15935 545 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 TADA2BQ86TJ2 420 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 SIX6OS1Q8N1H7 587 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 ARHGAP18Q8N392 663 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 CCSER2Q9H7U1 834 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 SMPD4Q9NXE4 827 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 LIMA1Q9UHB6 759 aaKnown RBP20.35■□□□□ 0.85
LMNA-221ENST00000506981 NAGPAQ9UK23 515 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 MRPS17Q9Y2R5 130 aaKnown RBP20.35■□□□□ 0.85
LMNA-221ENST00000506981 PIAS3Q9Y6X2 628 aa20.35■□□□□ 0.85
LMNA-221ENST00000506981 MAN2B1O00754 1011 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 COCHO43405 550 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 TLR5O60602 858 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 RALAP11233 206 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 KCNMA1Q12791 1236 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 PDGFRLQ15198 375 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 RAB41Q5JT25 222 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 CWF19L1Q69YN2 538 aaKnown RBP20.34■□□□□ 0.85
LMNA-221ENST00000506981 C1orf228Q6PIY5 440 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
LMNA-221ENST00000506981 MSANTD3Q96H12 275 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
LMNA-221ENST00000506981 CDK5RAP1Q96SZ6 601 aaKnown RBP20.34■□□□□ 0.85
LMNA-221ENST00000506981 RNF38Q9H0F5 515 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 C8orf33Q9H7E9 229 aaPredicted RBP20.34■□□□□ 0.85
LMNA-221ENST00000506981 GKN1Q9NS71 199 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 USP3Q9Y6I4 520 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 COL4A3Q01955 1670 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 MYOFQ9NZM1 2061 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 F5P12259 2224 aa20.34■□□□□ 0.85
LMNA-221ENST00000506981 A0A1W2PQH9 124 aa20.33■□□□□ 0.85
LMNA-221ENST00000506981 KANSL1LA0AUZ9 987 aa20.33■□□□□ 0.85
LMNA-221ENST00000506981 LEFTY2O00292 366 aa20.33■□□□□ 0.85
LMNA-221ENST00000506981 ARNTLO00327 626 aa20.33■□□□□ 0.85
LMNA-221ENST00000506981 CALCAP01258 141 aa20.33■□□□□ 0.85
LMNA-221ENST00000506981 GLULP15104 373 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms