RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 CLPTM1LQ96KA5 538 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 NRDE2Q9H7Z3 1164 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 ALG13Q9NP73 1137 aaKnown RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
SCLT1-208ENST00000506368 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
SCLT1-208ENST00000506368 PRR5-ARHGAP8B1AHC4 643 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 CHMP2AO43633 222 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 HNRNPCP07910 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCLT1-208ENST00000506368 SNRPAP09012 282 aaKnown RBP16.53■□□□□ 0.24
SCLT1-208ENST00000506368 ABCD1P33897 745 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 NOMO3P69849 1222 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 ARHGAP8P85298 464 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 SPIDRQ14159 915 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 STXBP5Q5T5C0 1151 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 MFSD7Q6UXD7 560 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 TMC7Q7Z402 723 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 POLNQ7Z5Q5 900 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 FBXO27Q8NI29 283 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 CMTM5Q96DZ9 223 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 RILPQ96NA2 401 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 THAP1Q9NVV9 213 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 RHBDL2Q9NX52 303 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 ADAMTS6Q9UKP5 1117 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 SYNPO2Q9UMS6 1093 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 PSME4Q14997 1843 aa16.53■□□□□ 0.24
SCLT1-208ENST00000506368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.52■□□□□ 0.24
SCLT1-208ENST00000506368 ETS1P14921 441 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PEX2P28328 305 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 CD97P48960 835 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PDE1BQ01064 536 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PICALMQ13492 652 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 CCNIQ14094 377 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PIGHQ14442 188 aaPredicted RBP16.52■□□□□ 0.24
SCLT1-208ENST00000506368 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 KAZNQ674X7 775 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 ABRAQ8N0Z2 381 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PYDC1Q8WXC3 89 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 USTQ9Y2C2 406 aa16.52■□□□□ 0.24
SCLT1-208ENST00000506368 TMEM221A6NGB7 291 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 TXNDC9O14530 226 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 TRDMT1O14717 391 aaKnown RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 DDNO94850 711 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 LYPLA2O95372 231 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 IFNB1P01574 187 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 KRT10P13645 584 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 ZFXP17010 805 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 PHEXP78562 749 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 NADK2Q4G0N4 442 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 HSF5Q4G112 596 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 CEP55Q53EZ4 464 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 RARS2Q5T160 578 aaKnown RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 ZFYVE27Q5T4F4 411 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 LPCAT4Q643R3 524 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 KBTBD6Q86V97 674 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 NUDCD3Q8IVD9 361 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 CERS5Q8N5B7 392 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 KLF6Q99612 283 aaPredicted RBP16.52■□□□□ 0.23
SCLT1-208ENST00000506368 HAUS8Q9BT25 410 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 GINM1Q9NU53 330 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 CDH22Q9UJ99 828 aa16.52■□□□□ 0.23
SCLT1-208ENST00000506368 SF3B1O75533 1304 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCLT1-208ENST00000506368 E5RJQ4 531 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 ZBTB39O15060 712 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 OR6B1O95007 311 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 CALB1P05937 261 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 P4HBP07237 508 aaKnown RBP16.51■□□□□ 0.23
SCLT1-208ENST00000506368 CD48P09326 243 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 CDKN2BP42772 138 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 PSMD7P51665 324 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 EMP3P54852 163 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
SCLT1-208ENST00000506368 FAAP100Q0VG06 881 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 C1QTNF12Q5T7M4 302 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 ZFP1Q6P2D0 407 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 SV2AQ7L0J3 742 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 NIPA2Q8N8Q9 360 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 FNDC8Q8TC99 324 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 BIRC8Q96P09 236 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 C11orf70Q9BRQ4 267 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 ZNF577Q9BSK1 485 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 TMEM121Q9BTD3 319 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 UNC45AQ9H3U1 944 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 FAIMQ9NVQ4 179 aa16.51■□□□□ 0.23
SCLT1-208ENST00000506368 APOBEC2Q9Y235 224 aaKnown RBP16.51■□□□□ 0.23
SCLT1-208ENST00000506368 AK5Q9Y6K8 562 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms