RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 FBXO44Q9H4M3 255 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 POPDC2Q9HBU9 364 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 NGRNQ9NPE2 291 aaKnown RBP12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.395e-7■■■■□ 20.6
POLR2J3-211ENST00000506060 ABI2Q9NYB9 513 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 USP18Q9UMW8 372 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 PCDHB12Q9Y5F1 795 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 CEP350Q5VT06 3117 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 LRRD1A4D1F6 860 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 TJP3O95049 919 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 F9P00740 461 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 ACRP10323 421 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 ITGB8P26012 769 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 MIPP30301 263 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 CHRNA3P32297 505 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 FLT3P36888 993 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 DAOAP59103 153 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 RPL10AP62906 217 aaKnown RBP12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 DEFB103AP81534 67 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 KRT17Q04695 432 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 GPR17Q13304 367 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 BRD3Q15059 726 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 CCDC14Q49A88 953 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 SCN4BQ8IWT1 228 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 ARHGAP18Q8N392 663 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 FAM172AQ8WUF8 416 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 VWCEQ96DN2 955 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 CEP295NLQ96MC4 621 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 KRT12Q99456 494 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 OSBPL8Q9BZF1 889 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 COMMD8Q9NX08 183 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 RASAL2Q9UJF2 1139 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 BACE2Q9Y5Z0 518 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 PTPRDP23468 1912 aa12.58□□□□□ -0.4
POLR2J3-211ENST00000506060 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 PHF2O75151 1096 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 GABBR2O75899 941 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 BEST1O76090 585 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 LTFP02788 710 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SOD2P04179 222 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 URODP06132 367 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 ATP11AP98196 1134 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC25A11Q02978 314 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 LMNB2Q03252 620 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 ADCY1Q08828 1119 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 DHX34Q14147 1143 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 PDK2Q15119 407 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 PSMD5Q16401 504 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 CDO1Q16878 200 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 WDR93Q6P2C0 686 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SCYL2Q6P3W7 929 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 VSIG1Q86XK7 387 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 CPNE8Q86YQ8 564 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 PSTKQ8IV42 348 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 KLHL7Q8IXQ5 586 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC39A11Q8N1S5 342 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 FIBCD1Q8N539 461 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 ZMIZ2Q8NF64 920 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 GRK7Q8WTQ7 553 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 BADQ92934 168 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 CFAP57Q96MR6 1250 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC2A13Q96QE2 648 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 KCNK16Q96T55 309 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 HERC2P3Q9BVR0 1158 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-211ENST00000506060 FRMD8P1Q9BZ68 369 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms