RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 MARCH9Q86YJ5 346 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 CRELD1Q96HD1 420 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 EHD2Q9NZN4 543 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 HCN2Q9UL51 889 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 ANK1P16157 1881 aa12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 URB1O60287 2271 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-219ENST00000505392 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 TRIM24O15164 1050 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 TULP3O75386 442 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 OLFM2O95897 454 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 OAS1P00973 400 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 PDGFRBP09619 1106 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 NDUFV2P19404 249 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 RBP5P82980 135 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 TAF10Q12962 218 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 GRIK2Q13002 908 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 MCM6Q14566 821 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 ANO4Q32M45 955 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 WDR45BQ5MNZ6 344 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 SDE2Q6IQ49 451 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 ETFBKMTQ8IXQ9 262 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 MYLPFQ96A32 169 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 CEP295NLQ96MC4 621 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 ACOX2Q99424 681 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 TTLL2Q9BWV7 592 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 IL21RQ9HBE5 538 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 CRTAC1Q9NQ79 661 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 DKK4Q9UBT3 224 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 OBSL1O75147 1896 aa12.34□□□□□ -0.43
CCHCR1-219ENST00000505392 PLXNB3Q9ULL4 1909 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 E2F8A0AVK6 867 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 F8VP50 259 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 ZNF720Q7Z2F6 126 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 CHPFQ8IZ52 775 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 CXorf38Q8TB03 319 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 CALML4Q96GE6 196 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 SLC6A17Q9H1V8 727 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 GAREM1Q9H706 876 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 PRDM16Q9HAZ2 1276 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 CD93Q9NPY3 652 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 BLOC1S4Q9NUP1 217 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 CDH9Q9ULB4 789 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 STARD13Q9Y3M8 1113 aa12.33□□□□□ -0.44
CCHCR1-219ENST00000505392 PCDH15Q96QU1 1955 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 ACACAQ13085 2346 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 A0A087WV48 116 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 A0A1B0GTW7 788 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 GOLGA8CPA6NN73 597 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 TRIM66O15016 1216 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 UBA7P41226 1012 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 IFRD2Q12894 506 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 EGFLAMQ63HQ2 1017 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 TERB1Q8NA31 727 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 OTUB2Q96DC9 234 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 MRGPRX1Q96LB2 322 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SLITRK1Q96PX8 696 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 MIR1-1HGQ9H1L0 117 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SPHK2Q9NRA0 654 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 TM7SF3Q9NS93 570 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SIX4Q9UIU6 781 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 ITGA11Q9UKX5 1188 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 SH3BP1Q9Y3L3 701 aa12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-219ENST00000505392 RAD54BQ9Y620 910 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms