RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 PIGZQ86VD9 579 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 SUGP1Q8IWZ8 645 aaKnown RBP21.8■■□□□ 1.08
DDR1-255ENST00000504927 FBXL6Q8N531 539 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 AOPEPQ8N6M6 819 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 KIAA1958Q8N8K9 716 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 TFAP2BQ92481 460 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 SHC3Q92529 594 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 LRRC3BQ96PB8 259 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 SLC22A12Q96S37 553 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 SMG9Q9H0W8 520 aaKnown RBP21.8■■□□□ 1.08
DDR1-255ENST00000504927 SIX2Q9NPC8 291 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 ARHGEF3Q9NR81 526 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 ARHGAP26Q9UNA1 814 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.8■■□□□ 1.08
DDR1-255ENST00000504927 CCL26Q9Y258 94 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 MUC6Q6W4X9 2439 aa21.8■■□□□ 1.08
DDR1-255ENST00000504927 OLFM2O95897 454 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 GLULP15104 373 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 PSEN1P49768 467 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 COPB1P53618 953 aaKnown RBP21.79■■□□□ 1.08
DDR1-255ENST00000504927 MLLT6P55198 1093 aaPredicted RBP21.79■■□□□ 1.08
DDR1-255ENST00000504927 PDE4CQ08493 712 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 PKDCCQ504Y2 493 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 KLHDC7AQ5VTJ3 777 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 CC2D1AQ6P1N0 951 aaPredicted RBP21.79■■□□□ 1.08
DDR1-255ENST00000504927 GPRIN1Q7Z2K8 1008 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 CCDC186Q7Z3E2 898 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 RNF38Q9H0F5 515 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 PLCB1Q9NQ66 1216 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 GMIPQ9P107 970 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 CA14Q9ULX7 337 aa21.79■■□□□ 1.08
DDR1-255ENST00000504927 GREB1Q4ZG55 1949 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 KRBA1A5PL33 1030 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 BECN2A8MW95 431 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 USP8P40818 1118 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 PLA2G4AP47712 749 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 CLCN5P51795 746 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 STARD6P59095 220 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 APBA1Q02410 837 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 MLF2Q15773 248 aaPredicted RBP21.78■■□□□ 1.08
DDR1-255ENST00000504927 MEA1Q16626 185 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 DPY19L2P1Q6NXN4 242 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 DHX40Q8IX18 779 aaKnown RBP21.78■■□□□ 1.08
DDR1-255ENST00000504927 ARHGAP18Q8N392 663 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 ZNF276Q8N554 614 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 UBA3Q8TBC4 463 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 CSGALNACT1Q8TDX6 532 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 KCTD13Q8WZ19 329 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 HSD3B7Q9H2F3 369 aa21.78■■□□□ 1.08
DDR1-255ENST00000504927 STK25O00506 426 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 BRD2P25440 801 aaKnown RBP21.77■■□□□ 1.08
DDR1-255ENST00000504927 BPIFB4P59827 614 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 PTK2Q05397 1052 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 TADA2BQ86TJ2 420 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 DDX42Q86XP3 938 aaKnown RBP eCLIP21.77■■□□□ 1.08
DDR1-255ENST00000504927 SLC35F5Q8WV83 523 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 ZNF606Q8WXB4 792 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 CDK5RAP1Q96SZ6 601 aaKnown RBP21.77■■□□□ 1.08
DDR1-255ENST00000504927 ZSWIM1Q9BR11 485 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 LRRC4Q9HBW1 653 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 DAAM1Q9Y4D1 1078 aa21.77■■□□□ 1.08
DDR1-255ENST00000504927 ARNTLO00327 626 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 CYP26A1O43174 497 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 MBL2P11226 248 aaPredicted RBP21.76■■□□□ 1.07
DDR1-255ENST00000504927 UCHL3P15374 230 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 GNA15P30679 374 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 TKTL1P51854 596 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 ZSCAN23Q3MJ62 389 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 PM20D1Q6GTS8 502 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 ASTLQ6HA08 431 aaPredicted RBP21.76■■□□□ 1.07
DDR1-255ENST00000504927 C1orf228Q6PIY5 440 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 SH3RF2Q8TEC5 729 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 HSFY1Q96LI6 401 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 NELL2Q99435 816 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 FAM83CQ9BQN1 747 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 LSM14BQ9BX40 385 aaKnown RBP21.76■■□□□ 1.07
DDR1-255ENST00000504927 NACA2Q9H009 215 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 CYLDQ9NQC7 956 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 GKN1Q9NS71 199 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 CLIC5Q9NZA1 410 aa21.76■■□□□ 1.07
DDR1-255ENST00000504927 DENND4CQ5VZ89 1909 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 LGALS16A8MUM7 142 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 M0QYV0 167 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 FOXN3O00409 490 aaPredicted RBP21.75■■□□□ 1.07
DDR1-255ENST00000504927 MAN2B1O00754 1011 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 COCHO43405 550 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 TLR5O60602 858 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 ZBED1O96006 694 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 RALAP11233 206 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 UBXN1Q04323 297 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 MTF1Q14872 753 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 PDGFRLQ15198 375 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 ZNF77Q15935 545 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 KLHDC10Q6PID8 442 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 ZNF852Q6ZMS4 543 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 FAM71AQ8IYT1 594 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 SCML4Q8N228 414 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 FLCNQ8NFG4 579 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 MSANTD3Q96H12 275 aa21.75■■□□□ 1.07
DDR1-255ENST00000504927 DDX23Q9BUQ8 820 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms