RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SLC32A1Q9H598 525 aa9.71□□□□□ -0.86
DHFR-202ENST00000504396 TMEM206Q9H813 350 aa9.71□□□□□ -0.86
DHFR-202ENST00000504396 ABCB6Q9NP58 842 aa9.71□□□□□ -0.86
DHFR-202ENST00000504396 AGAP1Q9UPQ3 857 aa9.71□□□□□ -0.86
DHFR-202ENST00000504396 ATXN2Q99700 1313 aaKnown RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 HELZP42694 1942 aaKnown RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 C2orf78A6NCI8 922 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 MEN1O00255 615 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 NOL4O94818 638 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 IL18RAPO95256 599 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 BMP15O95972 392 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 CFIP05156 583 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 HDCP19113 662 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 PLCG1P19174 1290 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 PDE6CP51160 858 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 ATXN3P54252 364 aaPredicted RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 IRX4P78413 519 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 LMAN2Q12907 356 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 POSTNQ15063 836 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 LMBRD2Q68DH5 695 aaPredicted RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 LPCAT2Q7L5N7 544 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 SPATA18Q8TC71 538 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 USP33Q8TEY7 942 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 RLN3Q8WXF3 142 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 RAD54LQ92698 747 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 HVCN1Q96D96 273 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 TRMT2BQ96GJ1 504 aaKnown RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 CNOT6LQ96LI5 555 aaKnown RBP9.7□□□□□ -0.86
DHFR-202ENST00000504396 FAM213AQ9BRX8 229 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 GTF3C4Q9UKN8 822 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 L1RE1Q9UN81 338 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 SNX9Q9Y5X1 595 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 STYXL1Q9Y6J8 313 aa9.7□□□□□ -0.86
DHFR-202ENST00000504396 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 MYMKA6NI61 221 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 HYAL3O43820 417 aaPredicted RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 KLF8O95600 359 aaPredicted RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 ABL1P00519 1130 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 TCF3P15923 654 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 CSRP1P21291 193 aaKnown RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 ANXA13P27216 316 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 PCSK1P29120 753 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 KDSRQ06136 332 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 CCDC142Q17RM4 750 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 SFR1Q86XK3 245 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 TMEFF1Q8IYR6 380 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 TMEM86AQ8N2M4 240 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 CSGALNACT2Q8N6G5 542 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 ALLCQ8N6M5 410 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 KIAA1958Q8N8K9 716 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 CACTINQ8WUQ7 758 aaKnown RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 HMGB4Q8WW32 186 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 SAAL1Q96ER3 474 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 MYRFLQ96LU7 910 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 CEP295NLQ96MC4 621 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 ACBD6Q9BR61 282 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 GTPBP2Q9BX10 602 aaKnown RBP9.69□□□□□ -0.86
DHFR-202ENST00000504396 IKZF4Q9H2S9 585 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 LINC00597Q9H2U6 94 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 FRYQ5TBA9 3013 aa9.69□□□□□ -0.86
DHFR-202ENST00000504396 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 SPAARA0A1B0GVQ0 90 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 SRRM3A6NNA2 597 aaPredicted RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 CDX4O14627 284 aaPredicted RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 HCRTO43612 131 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 PFKLP17858 780 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 DDIT3P35638 169 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 GRIK1P39086 918 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 OPRD1P41143 372 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 PSMC1P62191 440 aaKnown RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 SIM1P81133 766 aaPredicted RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 CYP27A1Q02318 531 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 IFRD2Q12894 506 aaPredicted RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 ACAP1Q15027 740 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 CRY1Q16526 586 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 C4orf50Q6ZRC1 276 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 FILIP1Q7Z7B0 1213 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 RASSF3Q86WH2 238 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 SYCP3Q8IZU3 236 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 HDDC3Q8N4P3 179 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 TXNDC5Q8NBS9 432 aaKnown RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 FUBP3Q96I24 572 aaKnown RBP eCLIP9.68□□□□□ -0.86
DHFR-202ENST00000504396 FAM84AQ96KN4 292 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 FIZ1Q96SL8 496 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 MRPL44Q9H9J2 332 aaKnown RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 ZDHHC4Q9NPG8 344 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 BLOC1S4Q9NUP1 217 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 SMPD4Q9NXE4 827 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 RBAKQ9NYW8 714 aaPredicted RBP9.68□□□□□ -0.86
DHFR-202ENST00000504396 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 TBC1D7Q9P0N9 293 aa9.68□□□□□ -0.86
DHFR-202ENST00000504396 SEL1LQ9UBV2 794 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms