RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 ZNF518BQ9C0D4 1074 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 RNF38Q9H0F5 515 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 INVSQ9Y283 1065 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 CPQQ9Y646 472 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 SPTBN2O15020 2390 aa11.41□□□□□ -0.58
SNCA-207ENST00000502987 SLC9A3R1O14745 358 aaPredicted RBP11.4□□□□□ -0.58
SNCA-207ENST00000502987 SLC30A4O14863 429 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 RTN3O95197 1032 aaPredicted RBP11.4□□□□□ -0.58
SNCA-207ENST00000502987 PFKLP17858 780 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 YWHAQP27348 245 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 RAP1GAPP47736 663 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 AP3M2P53677 418 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 NOP14P78316 857 aaKnown RBP11.4□□□□□ -0.58
SNCA-207ENST00000502987 DNM1Q05193 864 aaKnown RBP11.4□□□□□ -0.58
SNCA-207ENST00000502987 NCOA4Q13772 614 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 PPM1JQ5JR12 505 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 CCDC33Q8N5R6 958 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 FBXO32Q969P5 355 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 NACA2Q9H009 215 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 SMYD3Q9H7B4 428 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 CFAP97Q9P2B7 532 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 CHORDC1Q9UHD1 332 aaPredicted RBP11.4□□□□□ -0.58
SNCA-207ENST00000502987 NME7Q9Y5B8 376 aa11.4□□□□□ -0.58
SNCA-207ENST00000502987 THADAQ6YHU6 1953 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 DCLK1O15075 740 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 AKAP3O75969 853 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 RHOBTB1O94844 696 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 EPN2O95208 641 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 ZNF806P0C7X5 589 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 P4HA1P13674 534 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 TCF3P15923 654 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
SNCA-207ENST00000502987 CACNA2D1P54289 1103 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 SLC7A9P82251 487 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 EHHADHQ08426 723 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 BMT2Q1RMZ1 405 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 USP39Q53GS9 565 aaKnown RBP11.39□□□□□ -0.59
SNCA-207ENST00000502987 CEP135Q66GS9 1140 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNCA-207ENST00000502987 C12orf56Q8IXR9 622 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 PDZD8Q8NEN9 1154 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 PARD3BQ8TEW8 1205 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 CCDC47Q96A33 483 aaKnown RBP11.39□□□□□ -0.59
SNCA-207ENST00000502987 PAGE5Q96GU1 130 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 CHAMP1Q96JM3 812 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 KCNK16Q96T55 309 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 PNKPQ96T60 521 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 SMOC1Q9H4F8 434 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
SNCA-207ENST00000502987 KIAA1549LQ6ZVL6 1849 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 A0A1B0GVL5 298 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 LRRIQ3A6PVS8 624 aaPredicted RBP11.38□□□□□ -0.59
SNCA-207ENST00000502987 AP1G2O75843 785 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 ALDH1A2O94788 518 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 STAU1O95793 577 aaKnown RBP11.38□□□□□ -0.59
SNCA-207ENST00000502987 ADH1CP00326 375 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 APODP05090 189 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 CYP17A1P05093 508 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 MPLP40238 635 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 OPRD1P41143 372 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 SLC6A11P48066 632 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 ZXDBP98169 803 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 CREB5Q02930 508 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 STK4Q13043 487 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 DHCR24Q15392 516 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 SGSM1Q2NKQ1 1148 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 PLK5Q496M5 336 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 BTBD8Q5XKL5 378 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 ANO7Q6IWH7 933 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 ACOT1Q86TX2 421 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 DDX1Q92499 740 aaKnown RBP11.38□□□□□ -0.59
SNCA-207ENST00000502987 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
SNCA-207ENST00000502987 SPATA32Q96LK8 384 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 TPSD1Q9BZJ3 242 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNCA-207ENST00000502987 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 RCOR1Q9UKL0 485 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 FRMD4BQ9Y2L6 1034 aa11.38□□□□□ -0.59
SNCA-207ENST00000502987 K7EQS6 105 aa11.37□□□□□ -0.59
SNCA-207ENST00000502987 CALUO43852 315 aaPredicted RBP11.37□□□□□ -0.59
SNCA-207ENST00000502987 OAS1P00973 400 aaKnown RBP11.37□□□□□ -0.59
SNCA-207ENST00000502987 C4BPAP04003 597 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms