RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MCOLN1Q9GZU1 580 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 TMEM161AQ9NX61 479 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 GRHL1Q9NZI5 618 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 MYBPHLA2RUH7 354 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 H3BQF6 201 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 NBNO60934 754 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 TYMPP19971 482 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 ATP11AP98196 1134 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 DSC1Q08554 894 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 CDO1Q16878 200 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 CCDC142Q17RM4 750 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 PLEKHG4Q58EX7 1191 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 FAM35AQ86V20 835 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 TTC13Q8NBP0 860 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 FAM71BQ8TC56 605 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 HSPH1Q92598 858 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 PCED1BQ96HM7 432 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 RTP3Q9BQQ7 232 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 C11orf84Q9BUA3 381 aaPredicted RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 LRRC4Q9HBW1 653 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 KRT82Q9NSB4 513 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 DRG1Q9Y295 367 aaKnown RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 BEST1O76090 585 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 ENDOD1O94919 500 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 MRPS5P82675 430 aaKnown RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 ADIGQ0VDE8 80 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 PAN2Q504Q3 1202 aaKnown RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 C1orf53Q5VUE5 145 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 ZDHHC24Q6UX98 284 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 BBS12Q6ZW61 710 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 CYP4V2Q6ZWL3 525 aaPredicted RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 THEM5Q8N1Q8 247 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 CENPIQ92674 756 aaPredicted RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 DDX23Q9BUQ8 820 aaKnown RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 NGRNQ9NPE2 291 aaKnown RBP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.02■■□□□ 1.28
PTPN13-205ENST00000502971 WHRNQ9P202 907 aa23.02■■□□□ 1.28
PTPN13-205ENST00000502971 TMEM189-UBE2V1I3L0A0 370 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 I3L4J1 428 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 AGPSO00116 658 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 AP1G2O75843 785 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 FBXO21O94952 628 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 MNX1P50219 401 aaPredicted RBP23.01■■□□□ 1.27
PTPN13-205ENST00000502971 PLTPP55058 493 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 MAP3K7CLP57077 242 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 ADCY1Q08828 1119 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 MTMR3Q13615 1198 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 BYSLQ13895 437 aaKnown RBP23.01■■□□□ 1.27
PTPN13-205ENST00000502971 PDK2Q15119 407 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 KCTD19Q17RG1 926 aaPredicted RBP23.01■■□□□ 1.27
PTPN13-205ENST00000502971 INTS6LQ5JSJ4 861 aaKnown RBP23.01■■□□□ 1.27
PTPN13-205ENST00000502971 CFAP58Q5T655 872 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 FAM171BQ6P995 826 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 SEPT8Q92599 483 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 APBB2Q92870 758 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 ART4Q93070 314 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 SMARCD1Q96GM5 515 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 MTRF1LQ9UGC7 380 aaKnown RBP23.01■■□□□ 1.27
PTPN13-205ENST00000502971 PCDHB8Q9UN66 801 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 NEU2Q9Y3R4 380 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 DNAH12Q6ZR08 3092 aa23.01■■□□□ 1.27
PTPN13-205ENST00000502971 ENPP3O14638 875 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 GGCXP38435 758 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 ARSEP51690 589 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 CALCOCO2Q13137 446 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 GPNMBQ14956 572 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 SPDYCQ5MJ68 293 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 VSIG1Q86XK7 387 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 MAP7D3Q8IWC1 876 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 COLGALT2Q8IYK4 626 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 IQCKQ8N0W5 287 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 SIX6OS1Q8N1H7 587 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 CCHCR1Q8TD31 782 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 RUFY1Q96T51 708 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 SMOQ99835 787 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 STAU2Q9NUL3 570 aaKnown RBP eCLIP23■■□□□ 1.27
PTPN13-205ENST00000502971 ASIC3Q9UHC3 531 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 TSC2P49815 1807 aa23■■□□□ 1.27
PTPN13-205ENST00000502971 MDM4O15151 490 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 DAB1O75553 588 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 DDHD2O94830 711 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 SYF2O95926 243 aaKnown RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 ITIH2P19823 946 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 MATKP42679 507 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 HDAC4P56524 1084 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 MAPRE1Q15691 268 aaKnown RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 OVOS1Q6IE37 1185 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 SCYL2Q6P3W7 929 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 TMC3Q7Z5M5 1100 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 CCDC89Q8N998 374 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 DBF4BQ8NFT6 615 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 FBXO25Q8TCJ0 367 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 HASPINQ8TF76 798 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 NKD2Q969F2 451 aaPredicted RBP22.99■■□□□ 1.27
PTPN13-205ENST00000502971 TBC1D13Q9NVG8 400 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 DNPEPQ9ULA0 475 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 OPA1O60313 960 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 CST8O60676 142 aa22.99■■□□□ 1.27
PTPN13-205ENST00000502971 PPFIA2O75334 1257 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms