RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 E2F5Q15329 346 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF827Q17R98 1081 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF792Q3KQV3 632 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PLEKHN1Q494U1 663 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TIGD5Q53EQ6 642 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SETMARQ53H47 684 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CD276Q5ZPR3 534 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 GPR139Q6DWJ6 353 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 BTNL9Q6UXG8 535 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 RPTNQ6XPR3 784 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 RAPH1Q70E73 1250 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 H1FNTQ75WM6 255 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SZRD1Q7Z422 152 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 AMIGO3Q86WK7 504 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 NUP93Q8N1F7 819 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TTC39CQ8N584 583 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SRBD1Q8N5C6 995 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 USP6NLQ92738 828 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CUL5Q93034 780 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRIM43Q96BQ3 446 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF764Q96H86 408 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 INTS4Q96HW7 963 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF845Q96IR2 970 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 HIST1H2AHQ96KK5 128 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRAPPC9Q96Q05 1148 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PIGSQ96S52 555 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPP1R9BQ96SB3 815 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 HIST1H2AJQ99878 128 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 REEP2Q9BRK0 252 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 EIF2AQ9BY44 585 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRIM54Q9BYV2 358 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 OSBPL6Q9BZF3 934 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 FTOQ9C0B1 505 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ABHD16BQ9H3Z7 469 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SYNCQ9H7C4 482 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHODLQ9H9P2 273 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SMURF2Q9HAU4 748 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 DCAF16Q9NXF7 216 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRMT1Q9NXH9 659 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 RASAL2Q9UJF2 1139 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBX20Q9UMR3 447 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CTNND2Q9UQB3 1225 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CAMK2AQ9UQM7 478 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 NAALADL1Q9UQQ1 740 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM5Q9Y2B1 443 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 USP15Q9Y4E8 981 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATRNO75882 1429 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TNS3Q68CZ2 1445 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PASKQ96RG2 1323 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ABCA3Q99758 1704 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 BRD4O60885 1362 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 A0A087WZ62 844 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 NOTOA8MTQ0 251 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PI4K2BG5E9Z4 385 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 INO80B-WBP1J3KQ70 363 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ACOT7O00154 380 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 BTN3A1O00481 513 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SH2B2O14492 632 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 IPO8O15397 1037 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 DNPH1O43598 174 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBC1D4O60343 1298 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ENDOD1O94919 500 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ANXA1P04083 346 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TK1P04183 234 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATP5BP06576 529 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 RNASE1P07998 156 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 IL1R1P14778 569 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SPINK2P20155 84 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TGM1P22735 817 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 APEX1P27695 318 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CARSP49589 748 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARFIP2P53365 341 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 RCAN1P53805 252 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 POLR2FP61218 127 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 C17orf67Q0P5P2 114 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 NFATC3Q12968 1075 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 STK4Q13043 487 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TARDBPQ13148 414 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 ADAM15Q13444 863 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MAMLD1Q13495 774 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 SLMAPQ14BN4 828 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPA1Q15181 289 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBCCQ15814 346 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 MAN2A1Q16706 1144 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 DUSP28Q4G0W2 176 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 FLYWCH1Q4VC44 716 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 BMP2KLQ5H9B9 411 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMTC4Q5T4D3 741 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 LRCH2Q5VUJ6 765 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 TEPPQ6URK8 271 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 DENND5BQ6ZUT9 1274 aa4.69□□□□□ -1.66
HMGB1P21-201ENST00000502313 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms