RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 SLC16A3O15427 465 aaKnown RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 COCHO43405 550 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 STX10O60499 249 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 OLFM2O95897 454 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 TCF3P15923 654 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 PFKLP17858 780 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 GRSF1Q12849 480 aaKnown RBP eCLIP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 LRMPQ12912 555 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 STIM1Q13586 685 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 PPP1R26Q5T8A7 1209 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 HEATR6Q6AI08 1181 aaKnown RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 MAMSTRQ6ZN01 415 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 ELOA2Q8IYF1 753 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 SUMF1Q8NBK3 374 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 ZBTB44Q8NCP5 570 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 PDZD8Q8NEN9 1154 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 NELL1Q92832 810 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 HEXIM2Q96MH2 286 aaKnown RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 IER2Q9BTL4 223 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 CFAP97Q9P2B7 532 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-227ENST00000498548 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 HHLA1C9JL84 531 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 PSMA7O14818 248 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 FNTBP49356 437 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 STX17P56962 302 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 HECTD3Q5T447 861 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 OVCA2Q8WZ82 227 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 WBP2Q969T9 261 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 P2RY13Q9BPV8 354 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 HINFPQ9BQA5 517 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 CISHQ9NSE2 258 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-227ENST00000498548 CTNND2Q9UQB3 1225 aa17.04■□□□□ 0.32
NR1H3-227ENST00000498548 ANTXRLA6NF34 631 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 K7ESF4 209 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 LILRB5O75023 590 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 TBX18O95935 607 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 IRF1P10914 325 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 TRIM21P19474 475 aaKnown RBP17.03■□□□□ 0.32
NR1H3-227ENST00000498548 ACO1P21399 889 aaKnown RBP17.03■□□□□ 0.32
NR1H3-227ENST00000498548 RAD23BP54727 409 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 AMPD2Q01433 879 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 NR1H3Q13133 447 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 SRSF5Q13243 272 aaKnown RBP17.03■□□□□ 0.32
NR1H3-227ENST00000498548 MORC3Q14149 939 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-227ENST00000498548 CD101Q93033 1021 aa17.03■□□□□ 0.32
NR1H3-227ENST00000498548 GTPBP4Q9BZE4 634 aaKnown RBP17.03■□□□□ 0.32
NR1H3-227ENST00000498548 FAM92AA1XBS5 289 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 CYP26A1O43174 497 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 RNF40O75150 1001 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 NFATC1O95644 943 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 PPP2R5DQ14738 602 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 CAMK4Q16566 473 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 LPAL2Q16609 132 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 GAB4Q2WGN9 574 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 CCDC40Q4G0X9 1142 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 SNX30Q5VWJ9 437 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 TTI2Q6NXR4 508 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 SYNPOQ8N3V7 929 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 SLC35C1Q96A29 364 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 TMEM176AQ96HP8 235 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 ZFRQ96KR1 1074 aaKnown RBP17.02■□□□□ 0.32
NR1H3-227ENST00000498548 FBXO44Q9H4M3 255 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 NMUR1Q9HB89 426 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 OSER1Q9NX31 292 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 NUDT5Q9UKK9 219 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
NR1H3-227ENST00000498548 PTPRZ1P23471 2315 aaPredicted RBP17.02■□□□□ 0.31
NR1H3-227ENST00000498548 MDM4O15151 490 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 CYP17A1P05093 508 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 DRD1P21728 446 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 OPRD1P41143 372 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 SLC6A11P48066 632 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-227ENST00000498548 NRLP54845 237 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 DHCR24Q15392 516 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 DUSP16Q9BY84 665 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 FAM126AQ9BYI3 521 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-227ENST00000498548 NACA2Q9H009 215 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 TLR8Q9NR97 1041 aaKnown RBP17.01■□□□□ 0.31
NR1H3-227ENST00000498548 SCML2Q9UQR0 700 aa17.01■□□□□ 0.31
NR1H3-227ENST00000498548 A0A1W2PQH9 124 aa17■□□□□ 0.31
NR1H3-227ENST00000498548 HRO43593 1189 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms