RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 SLITRK1Q96PX8 696 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 PCDHB18PQ96TA0 734 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 CHP1Q99653 195 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 ULBP1Q9BZM6 244 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 NHEJ1Q9H9Q4 299 aaPredicted RBP12.05□□□□□ -0.48
CTTN-208ENST00000498223 COMMD8Q9NX08 183 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 ARHGAP20Q9P2F6 1191 aa12.05□□□□□ -0.48
CTTN-208ENST00000498223 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 DENND4AQ7Z401 1863 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 E5RJQ4 531 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ZNF197O14709 1029 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 TNFRSF10BO14763 440 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 FBXO21O94952 628 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 FGF19O95750 216 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ZBED1O96006 694 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 USP17L7P0C7H9 530 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 GABRR2P28476 465 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 CYLC1P35663 651 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 LTBRP36941 435 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 MTHFRP42898 656 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 KIF11P52732 1056 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 USP46P62068 366 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 NTHL1P78549 312 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 TAF10Q12962 218 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ARID5BQ14865 1188 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ARHGAP15Q53QZ3 475 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 CCDC122Q5T0U0 273 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 PTCRAQ6ISU1 281 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 ACAD10Q6JQN1 1059 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 MMS22LQ6ZRQ5 1243 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 TMTC1Q8IUR5 882 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 WDTC1Q8N5D0 677 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 STK32AQ8WU08 396 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 BAG1Q99933 345 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 C11orf70Q9BRQ4 267 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ADAM7Q9H2U9 754 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ZNF334Q9HCZ1 680 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 TLR8Q9NR97 1041 aaKnown RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 DNMT3BQ9UBC3 853 aaKnown RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 CHORDC1Q9UHD1 332 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
CTTN-208ENST00000498223 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
CTTN-208ENST00000498223 SSU72P8A0A1W2PR75 194 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 GOLGA8SH3BPF8 625 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 DDX3XO00571 662 aaKnown RBP eCLIP12.03□□□□□ -0.48
CTTN-208ENST00000498223 RTN2O75298 545 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 POU2F2P09086 479 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 HMGA1P17096 107 aaKnown RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 FSHRP23945 695 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 CDC25CP30307 473 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 CDK17Q00537 523 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 GFPT1Q06210 699 aaPredicted RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 PTPN20Q4JDL3 420 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 RAB41Q5JT25 222 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 PHLDB2Q86SQ0 1253 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 ARHGAP18Q8N392 663 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 ING5Q8WYH8 240 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 MRPS31Q92665 395 aaKnown RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 FAM149B1Q96BN6 582 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 C18orf8Q96DM3 657 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 TRMT2BQ96GJ1 504 aaKnown RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 MSLNLQ96KJ4 702 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 CPXM1Q96SM3 734 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 TTLL2Q9BWV7 592 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 EPHX3Q9H6B9 360 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 TRPC7Q9HCX4 862 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 CNGB3Q9NQW8 809 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 GMIPQ9P107 970 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 CDH22Q9UJ99 828 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 NAGPAQ9UK23 515 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 SCML2Q9UQR0 700 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 FAM50BQ9Y247 325 aa12.03□□□□□ -0.48
CTTN-208ENST00000498223 MRPS23Q9Y3D9 190 aaKnown RBP12.03□□□□□ -0.48
CTTN-208ENST00000498223 A0A087X0T9 212 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 SART1O43290 800 aaKnown RBP12.02□□□□□ -0.49
CTTN-208ENST00000498223 FTLP02792 175 aaPredicted RBP12.02□□□□□ -0.49
CTTN-208ENST00000498223 ERBB2P04626 1255 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 CALB1P05937 261 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 FAM228BP0C875 321 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 RALAP11233 206 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 GZMAP12544 262 aa12.02□□□□□ -0.49
CTTN-208ENST00000498223 UNGP13051 313 aaPredicted RBP12.02□□□□□ -0.49
CTTN-208ENST00000498223 IL9P15248 144 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms