RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FBXO44Q9H4M3 255 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 HPS4Q9NQG7 708 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 COL4A2P08572 1712 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 ANAPC1Q9H1A4 1944 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 TNFRSF10BO14763 440 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 ARSAP15289 507 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 SLC7A9P82251 487 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 PPP2R5DQ14738 602 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 PON2Q15165 354 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 CBWD6Q4V339 395 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 CBWD3Q5JTY5 395 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 CBWD5Q5RIA9 395 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 MAMSTRQ6ZN01 415 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 MAML2Q8IZL2 1156 aaPredicted RBP16.22■□□□□ 0.19
NUP50-219ENST00000497960 ATP2A3Q93084 1043 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 EXOC4Q96A65 974 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 SRRTQ9BXP5 876 aaKnown RBP16.22■□□□□ 0.19
NUP50-219ENST00000497960 FAM124BQ9H5Z6 455 aaPredicted RBP16.22■□□□□ 0.19
NUP50-219ENST00000497960 CSNK1G1Q9HCP0 422 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 IL37Q9NZH6 218 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 CHORDC1Q9UHD1 332 aaPredicted RBP16.22■□□□□ 0.19
NUP50-219ENST00000497960 COQ4Q9Y3A0 265 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
NUP50-219ENST00000497960 LEFTY2O00292 366 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 OLFM2O95897 454 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 OAS1P00973 400 aaKnown RBP16.21■□□□□ 0.19
NUP50-219ENST00000497960 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
NUP50-219ENST00000497960 CCR3P51677 355 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 GRSF1Q12849 480 aaKnown RBP eCLIP16.21■□□□□ 0.19
NUP50-219ENST00000497960 NR1H3Q13133 447 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 ZNF394Q53GI3 561 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 HECTD3Q5T447 861 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
NUP50-219ENST00000497960 ZMIZ2Q8NF64 920 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 TATDN2Q93075 761 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 SLC35C1Q96A29 364 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
NUP50-219ENST00000497960 HEXIM2Q96MH2 286 aaKnown RBP16.21■□□□□ 0.19
NUP50-219ENST00000497960 FUCA2Q9BTY2 467 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 RNF38Q9H0F5 515 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 ECT2Q9H8V3 914 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 PRMT8Q9NR22 394 aaPredicted RBP16.21■□□□□ 0.19
NUP50-219ENST00000497960 CISHQ9NSE2 258 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 SMPD4Q9NXE4 827 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 CPQQ9Y646 472 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 R4GN57 208 aa16.21■□□□□ 0.19
NUP50-219ENST00000497960 MYH10P35580 1976 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 PRR23AA6NEV1 266 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 OTOL1A6NHN0 477 aaPredicted RBP16.2■□□□□ 0.18
NUP50-219ENST00000497960 BEST1O76090 585 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 GNA14O95837 355 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
NUP50-219ENST00000497960 MYL5Q02045 173 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 CETN1Q12798 172 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 ASCL5Q7RTU5 278 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 FAM114A1Q8IWE2 563 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 SYNPOQ8N3V7 929 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 SPEM1Q8N4L4 309 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 AOPEPQ8N6M6 819 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 KIAA1958Q8N8K9 716 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 MED15Q96RN5 788 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 NACA2Q9H009 215 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 RBM12Q9NTZ6 932 aaKnown RBP16.2■□□□□ 0.18
NUP50-219ENST00000497960 GMIPQ9P107 970 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 NFE2L3Q9Y4A8 694 aa16.2■□□□□ 0.18
NUP50-219ENST00000497960 FAM92AA1XBS5 289 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 SLC9A3R1O14745 358 aaPredicted RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 NFATC1O95644 943 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 CXCL12P48061 93 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 FMO5P49326 533 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 TUBP50607 506 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 CUL2Q13617 745 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 EML3Q32P44 896 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 PPP1R26Q5T8A7 1209 aaPredicted RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 CLEC20AQ6ZU45 233 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 JAKMIP2Q96AA8 810 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 TMEM176AQ96HP8 235 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 ARID3AQ99856 593 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 FAM126AQ9BYI3 521 aaPredicted RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 TLR8Q9NR97 1041 aaKnown RBP16.19■□□□□ 0.18
NUP50-219ENST00000497960 ZSCAN32Q9NX65 697 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 CFAP97Q9P2B7 532 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 PCDHGA2Q9Y5H1 932 aa16.19■□□□□ 0.18
NUP50-219ENST00000497960 EP300Q09472 2414 aaPredicted RBP16.18■□□□□ 0.18
NUP50-219ENST00000497960 COCHO43405 550 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 LMNAP02545 664 aaKnown RBP16.18■□□□□ 0.18
NUP50-219ENST00000497960 ZDHHC11BP0C7U3 371 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
NUP50-219ENST00000497960 TBXAS1P24557 533 aaPredicted RBP16.18■□□□□ 0.18
NUP50-219ENST00000497960 GJA4P35212 333 aa16.18■□□□□ 0.18
NUP50-219ENST00000497960 RAD23BP54727 409 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms