RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DENND5BQ6ZUT9 1274 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 GPR149Q86SP6 731 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 PIGZQ86VD9 579 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 PASD1Q8IV76 773 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 SLC20A1Q8WUM9 679 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 SLC35F5Q8WV83 523 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 PSMG2Q969U7 264 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 ZNF707Q96C28 371 aaPredicted RBP21.13■□□□□ 0.97
CTSD-206ENST00000497544 CNTNAP3BQ96NU0 1288 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 CNTNAP3Q9BZ76 1288 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 ADAM7Q9H2U9 754 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 HAUS4Q9H6D7 363 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 PNPLA8Q9NP80 782 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 SEPT11Q9NVA2 429 aaKnown RBP21.13■□□□□ 0.97
CTSD-206ENST00000497544 IMPACTQ9P2X3 320 aa21.13■□□□□ 0.97
CTSD-206ENST00000497544 GALR2O43603 387 aaPredicted RBP21.12■□□□□ 0.97
CTSD-206ENST00000497544 RTN3O95197 1032 aaPredicted RBP21.12■□□□□ 0.97
CTSD-206ENST00000497544 SERPING1P05155 500 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 CHRNB2P17787 502 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 MTMR3Q13615 1198 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 TMEM35BQ8NCS4 154 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 STKLD1Q8NE28 680 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 MSLNLQ96KJ4 702 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 DNAJC7Q99615 494 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 CORO1BQ9BR76 489 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 S1PR5Q9H228 398 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 LRRC4Q9HBW1 653 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 COMMD8Q9NX08 183 aa21.12■□□□□ 0.97
CTSD-206ENST00000497544 LOC730098B7Z3J9 87 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 HHLA1C9JL84 531 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 TULP2O00295 520 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 PAPLNO95428 1278 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 HNRNPH3P31942 346 aaKnown RBP21.11■□□□□ 0.97
CTSD-206ENST00000497544 PLA2G4AP47712 749 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 RGS7P49802 495 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 SLC5A3P53794 718 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 FMO1Q01740 532 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 IFRD2Q12894 506 aaPredicted RBP21.11■□□□□ 0.97
CTSD-206ENST00000497544 CYP4A22Q5TCH4 519 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 PMF1Q6P1K2 205 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 TRIM72Q6ZMU5 477 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 GRASPQ7Z6J2 395 aaPredicted RBP21.11■□□□□ 0.97
CTSD-206ENST00000497544 HSFY1Q96LI6 401 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 RIPOR3Q96MK2 946 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 NOX5Q96PH1 765 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 FBXO44Q9H4M3 255 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 ASAH2Q9NR71 780 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 ST7Q9NRC1 585 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 ABHD10Q9NUJ1 306 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 DNMT3BQ9UBC3 853 aaKnown RBP21.11■□□□□ 0.97
CTSD-206ENST00000497544 UXTQ9UBK9 157 aaPredicted RBP21.11■□□□□ 0.97
CTSD-206ENST00000497544 GREB1Q4ZG55 1949 aa21.11■□□□□ 0.97
CTSD-206ENST00000497544 TNFRSF10BO14763 440 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 LSM8O95777 96 aaKnown RBP21.1■□□□□ 0.97
CTSD-206ENST00000497544 HMGA1P17096 107 aaKnown RBP21.1■□□□□ 0.97
CTSD-206ENST00000497544 YWHAQP27348 245 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 ACADSBP45954 432 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 NUBP1P53384 320 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 ARID5BQ14865 1188 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 ZNF571Q7Z3V5 609 aaPredicted RBP21.1■□□□□ 0.97
CTSD-206ENST00000497544 VPS36Q86VN1 386 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 HS6ST3Q8IZP7 471 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 WDTC1Q8N5D0 677 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 TC2NQ8N9U0 490 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 LEMD2Q8NC56 503 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 STK32AQ8WU08 396 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 KCTD13Q8WZ19 329 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 HCFC1R1Q9NWW0 138 aa21.1■□□□□ 0.97
CTSD-206ENST00000497544 ZNF638Q14966 1978 aaKnown RBP21.1■□□□□ 0.97
CTSD-206ENST00000497544 PDGFBP01127 241 aaPredicted RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 RHOP08100 348 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 MYL4P12829 197 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 CDH5P33151 784 aaPredicted RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 MTHFRP42898 656 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 KIF11P52732 1056 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 SNX16P57768 344 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 CBX2Q14781 532 aaPredicted RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 PABPC1LQ4VXU2 614 aaKnown RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 PDZD4Q76G19 769 aaPredicted RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 SMRP1Q8NCR6 262 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 C1orf131Q8NDD1 294 aaKnown RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 SCAMP5Q8TAC9 235 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 NKD2Q969F2 451 aaPredicted RBP21.09■□□□□ 0.97
CTSD-206ENST00000497544 RMDN1Q96DB5 314 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 MYRFLQ96LU7 910 aa21.09■□□□□ 0.97
CTSD-206ENST00000497544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.09■□□□□ 0.97
CTSD-206ENST00000497544 C2orf16Q68DN1 1984 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 ZNF197O14709 1029 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 FGF19O95750 216 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 CYP1A1P04798 512 aaPredicted RBP21.08■□□□□ 0.97
CTSD-206ENST00000497544 LCP1P13796 627 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 TKTL1P51854 596 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 USP46P62068 366 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 NTHL1P78549 312 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 RAB41Q5JT25 222 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 HGSNATQ68CP4 663 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 GPRIN1Q7Z2K8 1008 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 DGLUCYQ7Z3D6 616 aa21.08■□□□□ 0.97
CTSD-206ENST00000497544 ERICH1Q86X53 443 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms