RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 ARGLU1Q9NWB6 273 aaPredicted RBP12.76□□□□□ -0.37
HPS1-213ENST00000497527 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 SPG21Q9NZD8 308 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
HPS1-213ENST00000497527 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
HPS1-213ENST00000497527 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 NT5C1B-RDH14C9J2C7 533 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 GJB5O95377 273 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 EFEMP2O95967 443 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 ZBED1O96006 694 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 KRT1P04264 644 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 PYGMP11217 842 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 PTPN7P35236 360 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 FLT3P36888 993 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 MATKP42679 507 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 GLUD2P49448 558 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 ADCY1Q08828 1119 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 ELF2Q15723 593 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 PSMD5Q16401 504 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 CCDC142Q17RM4 750 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 GREB1Q4ZG55 1949 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 C8orf74Q6P047 294 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 FIBCD1Q8N539 461 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 TEKT4Q8WW24 435 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 DDX23Q9BUQ8 820 aaKnown RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 ULBP1Q9BZM6 244 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 POPDC2Q9HBU9 364 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 NGRNQ9NPE2 291 aaKnown RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 TMLHEQ9NVH6 421 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.75□□□□□ -0.37
HPS1-213ENST00000497527 ABI2Q9NYB9 513 aaPredicted RBP12.75□□□□□ -0.37
HPS1-213ENST00000497527 HSFX1Q9UBD0 423 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 INSL6Q9Y581 213 aa12.75□□□□□ -0.37
HPS1-213ENST00000497527 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 CAPN9O14815 690 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 GRAP2O75791 330 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 GABBR2O75899 941 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 TRUB2O95900 331 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 URODP06132 367 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 MIPP30301 263 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 GJC1P36383 396 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 RPL10AP62906 217 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 SLC25A11Q02978 314 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 KRT17Q04695 432 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 ZNF211Q13398 564 aaPredicted RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 SLC25A52Q3SY17 297 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 CCDC14Q49A88 953 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 FAM117BQ6P1L5 589 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 MAP7D3Q8IWC1 876 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 ARHGAP18Q8N392 663 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 HERVK_113Q902F9 699 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.37
HPS1-213ENST00000497527 PIWIL1Q96J94 861 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 SLC2A13Q96QE2 648 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 KCNK16Q96T55 309 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 OSBPL8Q9BZF1 889 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.74□□□□□ -0.37
HPS1-213ENST00000497527 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 EHD2Q9NZN4 543 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
HPS1-213ENST00000497527 USP18Q9UMW8 372 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 RWDD3Q9Y3V2 267 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 USP3Q9Y6I4 520 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
HPS1-213ENST00000497527 V9GYY5 206 aaPredicted RBP12.74□□□□□ -0.37
HPS1-213ENST00000497527 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
HPS1-213ENST00000497527 FSCN2O14926 492 aa12.73□□□□□ -0.37
HPS1-213ENST00000497527 MDM4O15151 490 aa12.73□□□□□ -0.37
HPS1-213ENST00000497527 PHF2O75151 1096 aa12.73□□□□□ -0.37
HPS1-213ENST00000497527 TJP3O95049 919 aa12.73□□□□□ -0.37
HPS1-213ENST00000497527 RTN3O95197 1032 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms