RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ARFGAP3Q9NP61 516 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 GDAP2Q9NXN4 497 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 RSPH14Q9UHP6 348 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 ZMYND8Q9ULU4 1186 aaPredicted RBP6.76□□□□□ -1.33
SIK3-213ENST00000497049 MYO6Q9UM54 1294 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 CAPN11Q9UMQ6 739 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 AGAP1Q9UPQ3 857 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 INSL6Q9Y581 213 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 SIP14410 1827 aa6.76□□□□□ -1.33
SIK3-213ENST00000497049 ERICH4A6NGS2 130 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 A6NNZ2 444 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TBKBP1A7MCY6 615 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 KPNA7A9QM74 516 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TMEM189-UBE2V1I3L0A0 370 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 DDX3YO15523 660 aaKnown RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 ZSCAN12O43309 604 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 GJB5O95377 273 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 POMCP01189 267 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 ITGB3P05106 788 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 GALTP07902 379 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 FGFR1P11362 822 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 UCHL3P15374 230 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SCNN1GP51170 649 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 MFAP3P55082 362 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 GSCP56915 257 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 MYL6P60660 151 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 MYL7Q01449 175 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 GCNT1Q02742 428 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SOX4Q06945 474 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 BIRC3Q13489 604 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TRIM14Q14142 442 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 DOC2BQ14184 412 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TUBB8Q3ZCM7 444 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TTC31Q49AM3 519 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 ARHGAP29Q52LW3 1261 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 E4F1Q66K89 784 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 LMBRD2Q68DH5 695 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 SCARA3Q6AZY7 606 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 CC2D1AQ6P1N0 951 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 CD300LGQ6UXG3 332 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SYT10Q6XYQ8 523 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 RSRC2Q7L4I2 434 aaKnown RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 LIMS2Q7Z4I7 341 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 PPFIBP1Q86W92 1011 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 ZNF280BQ86YH2 543 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 CMTR2Q8IYT2 770 aaKnown RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 TET1Q8NFU7 2136 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 NEK11Q8NG66 645 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 OR8K1Q8NGG5 319 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SYN2Q92777 582 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 HPDLQ96IR7 371 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 PPP1R13BQ96KQ4 1090 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SLC9A7Q96T83 725 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 RAD9AQ99638 391 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 GDF15Q99988 308 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 COLEC11Q9BWP8 271 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 NRSN2Q9GZP1 204 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 INTS2Q9H0H0 1204 aaKnown RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 DEF6Q9H4E7 631 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 NRDE2Q9H7Z3 1164 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 CYP3A43Q9HB55 503 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SIX2Q9NPC8 291 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 UBE2TQ9NPD8 197 aaPredicted RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 MED4Q9NPJ6 270 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TBC1D13Q9NVG8 400 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 AIPL1Q9NZN9 384 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 APEX2Q9UBZ4 518 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 PLAGL2Q9UPG8 496 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 CNTN6Q9UQ52 1028 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 FAN1Q9Y2M0 1017 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 RRP15Q9Y3B9 282 aaKnown RBP6.75□□□□□ -1.33
SIK3-213ENST00000497049 JRKLQ9Y4A0 524 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 TTC3P53804 2025 aa6.75□□□□□ -1.33
SIK3-213ENST00000497049 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 NRP1O14786 923 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 GSC2O15499 205 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 LRRN2O75325 713 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 TACC1O75410 805 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 ERLIN1O75477 346 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 B3GAT3O94766 335 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 KRT19P08727 400 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 P4HA1P13674 534 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 TRIM21P19474 475 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 OAS2P29728 719 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 POLR2BP30876 1174 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 HNRNPH3P31942 346 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 MAGEA10P43363 369 aaPredicted RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 ALDH7A1P49419 539 aaKnown RBP6.74□□□□□ -1.33
SIK3-213ENST00000497049 AARSP49588 968 aaKnown RBP eCLIP6.74□□□□□ -1.33
SIK3-213ENST00000497049 TAF6P49848 677 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 KLK7P49862 253 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 CLCNKBP51801 687 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 GUCY2FP51841 1108 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 CORO7P57737 925 aa6.74□□□□□ -1.33
SIK3-213ENST00000497049 POLR2FP61218 127 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms