RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	DLG4	P78352	724 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	SLC7A9	P82251	487 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	CRY1	Q16526	586 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	ZNF699	Q32M78	642 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	UNC13D	Q70J99	1090 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	DDX1	Q92499	740 aa	Known RBP	10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	BHMT	Q93088	406 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	INTS4	Q96HW7	963 aa	Known RBP	10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	TTLL2	Q9BWV7	592 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	GZF1	Q9H116	711 aa	Predicted RBP	10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	FAM13B	Q9NYF5	915 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	EBF1	Q9UH73	591 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	NUDT5	Q9UKK9	219 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	MMP17	Q9ULZ9	603 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	PCDHA7	Q9UN72	937 aa		10.85	□□□□□ -0.67
PSMD2-220	ENST00000496925	DNAH14	Q0VDD8	3507 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	CACNA1A	O00555	2505 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	TCRBV21S2A2	A0A5A6	115 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	SLC9A3R1	O14745	358 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	EIF3D	O15371	548 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	PPP6R2	O75170	966 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	BEST1	O76090	585 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	ALDH1A2	O94788	518 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	KIF20A	O95235	890 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	OAS1	P00973	400 aa	Known RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	HSP90AA1	P07900	732 aa	Known RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	LIMK1	P53667	647 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	MAP3K7CL	P57077	242 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	NOP14	P78316	857 aa	Known RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	NCOA4	Q13772	614 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	KNOP1	Q1ED39	458 aa	Known RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	ZNF667	Q5HYK9	610 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	HECTD3	Q5T447	861 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	SH3PXD2A	Q5TCZ1	1133 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	BTBD8	Q5XKL5	378 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	SPOPL	Q6IQ16	392 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	KIAA1211L	Q6NV74	962 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	TPGS1	Q6ZTW0	290 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	PAQR9	Q6ZVX9	377 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	FAM35A	Q86V20	835 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	TMEM25	Q86YD3	366 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	BBS7	Q8IWZ6	715 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	IL17RC	Q8NAC3	791 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	SYAP1	Q96A49	352 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	ELOVL4	Q9GZR5	314 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	XYLT2	Q9H1B5	865 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	CUEDC2	Q9H467	287 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	MMRN2	Q9H8L6	949 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	POLM	Q9NP87	494 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	FAM49B	Q9NUQ9	324 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	EHD2	Q9NZN4	543 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	MBD1	Q9UIS9	605 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	TSC2	P49815	1807 aa		10.84	□□□□□ -0.67
PSMD2-220	ENST00000496925	MDM4	O15151	490 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	RTN3	O95197	1032 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	VNN1	O95497	513 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	ADH1C	P00326	375 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	C4BPA	P04003	597 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	CFI	P05156	583 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	TCF3	P15923	654 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	PML	P29590	882 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	GRIA2	P42262	883 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	PTGER3	P43115	390 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	PPP3CC	P48454	512 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	NDST1	P52848	882 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	SLC5A3	P53794	718 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	MRPS21	P82921	87 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	GAD2	Q05329	585 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	STK4	Q13043	487 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	C10orf76	Q5T2E6	689 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	DAB2IP	Q5VWQ8	1189 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	CEP135	Q66GS9	1140 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	PMS2CL	Q68D20	193 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	LPCAT2	Q7L5N7	544 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	CEP57L1	Q8IYX8	460 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	C12orf29	Q8N999	325 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	DEFB124	Q8NES8	71 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	SLC2A14	Q8TDB8	520 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	CNOT6L	Q96LI5	555 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	SMO	Q99835	787 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	GTPBP2	Q9BX10	602 aa	Known RBP	10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	TMEM9B	Q9NQ34	198 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	KRT82	Q9NSB4	513 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	TMEM74B	Q9NUR3	256 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	HMGXB4	Q9UGU5	601 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	ATP8B3	O60423	1300 aa		10.83	□□□□□ -0.68
PSMD2-220	ENST00000496925	LNP1	A1A4G5	178 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	C1QTNF9B	B2RNN3	333 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	ADAM23	O75077	832 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	TULP3	O75386	442 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	YEATS4	O95619	227 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	HMBS	P08397	361 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	C1QTNF9	P0C862	333 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	ZSCAN22	P10073	491 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	ATIC	P31939	592 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	DNM1	Q05193	864 aa	Known RBP	10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	ZNF252P-AS1	Q0IIN9	211 aa		10.82	□□□□□ -0.68
PSMD2-220	ENST00000496925	PKP1	Q13835	747 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms