RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 OR6C75A6NL08 312 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 TFE3P19532 575 aaPredicted RBP17.7■□□□□ 0.42
LMNA-216ENST00000496738 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
LMNA-216ENST00000496738 RWDD2BP57060 319 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 MRPS5P82675 430 aaKnown RBP17.7■□□□□ 0.42
LMNA-216ENST00000496738 ERCC6LQ2NKX8 1250 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 CCDC14Q49A88 953 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 ZFYVE27Q5T4F4 411 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 RNF19BQ6ZMZ0 732 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 RHOT1Q8IXI2 618 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 EPC1Q9H2F5 836 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 ZWILCHQ9H900 591 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 PCSK1NQ9UHG2 260 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SLC27A5Q9Y2P5 690 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 PTPRDP23468 1912 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 H7C4K7 107 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 LRCH4O75427 683 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 EFEMP2O95967 443 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 FGGP02679 453 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 DNAJB2P25686 324 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 PSMD5Q16401 504 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 DDR2Q16832 855 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SMTNL2Q2TAL5 461 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SLC26A9Q7LBE3 791 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 NIPA2Q8N8Q9 360 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SCAMP5Q8TAC9 235 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 GPR152Q8TDT2 470 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 FNIP1Q8TF40 1166 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 AUTS2Q8WXX7 1259 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 AP1M1Q9BXS5 423 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 CARD9Q9H257 536 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SPG21Q9NZD8 308 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
LMNA-216ENST00000496738 CSPG5O95196 566 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 RNF168Q8IYW5 571 aaPredicted RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 FIBCD1Q8N539 461 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 LBHD1Q9BQE6 289 aaPredicted RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 PCDHB5Q9Y5E4 795 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 LCHNA4D1U4 455 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 YJEFN3A6XGL0 299 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 E7ENQ6 273 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 PGRMC1O00264 195 aaKnown RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 CES2O00748 559 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 TBC1D4O60343 1298 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 SDC4P31431 198 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 NFE2Q16621 373 aaPredicted RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 KCNT1Q5JUK3 1230 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 COL13A1Q5TAT6 717 aaPredicted RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 HERC6Q8IVU3 1022 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 GOLGA1Q92805 767 aa17.69■□□□□ 0.42
LMNA-216ENST00000496738 RBM12Q9NTZ6 932 aaKnown RBP17.69■□□□□ 0.42
LMNA-216ENST00000496738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
LMNA-216ENST00000496738 MTMR11A4FU01 709 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 CCDC85CA6NKD9 419 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 PSTPIP1O43586 416 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 SOD2P04179 222 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 ATP2A2P16615 1042 aaKnown RBP17.68■□□□□ 0.42
LMNA-216ENST00000496738 IL1R2P27930 398 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 DAOAP59103 153 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 HTRA4P83105 476 aaPredicted RBP17.68■□□□□ 0.42
LMNA-216ENST00000496738 ELF2Q15723 593 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 LONRF2Q1L5Z9 754 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 EFHC1Q5JVL4 640 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 SEL1L2Q5TEA6 688 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 CCDC50Q8IVM0 306 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 DEFB106AQ8N104 65 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 RASGEF1CQ8N431 466 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 SPATA4Q8NEY3 305 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 FBXO22Q8NEZ5 403 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 ACTRT1Q8TDG2 376 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 HERVK_113Q902F9 699 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 SEPT5Q99719 369 aaPredicted RBP17.68■□□□□ 0.42
LMNA-216ENST00000496738 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 ADAM33Q9BZ11 813 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 CRISPLD1Q9H336 500 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 ASNSD1Q9NWL6 643 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 LCMT1Q9UIC8 334 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 EFCAB8A8MWE9 144 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 RNF8O76064 485 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 VNN2O95498 520 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 ZBED1O96006 694 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 OR1D2P34982 312 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 SLC5A3P53794 718 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 MRPS25P82663 173 aaKnown RBP17.68■□□□□ 0.42
LMNA-216ENST00000496738 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 UBXN4Q92575 508 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 RNF25Q96BH1 459 aaPredicted RBP17.68■□□□□ 0.42
LMNA-216ENST00000496738 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
LMNA-216ENST00000496738 HSF2BPO75031 334 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 KRT1P04264 644 aa17.67■□□□□ 0.42
LMNA-216ENST00000496738 MIPP30301 263 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms