RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ECEL1O95672 775 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 GAS8O95995 478 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 FGFR1P11362 822 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 ECHS1P30084 290 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 KLF1Q13351 362 aaPredicted RBP17.07■□□□□ 0.32
CBX4-204ENST00000495122 CCNG2Q16589 344 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
CBX4-204ENST00000495122 DRICH1Q6PGQ1 229 aaPredicted RBP17.07■□□□□ 0.32
CBX4-204ENST00000495122 ADGRD2Q7Z7M1 963 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 CRYBG2Q8N1P7 616 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 SPATA18Q8TC71 538 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 CCHCR1Q8TD31 782 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 OSBPL8Q9BZF1 889 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 TRIM7Q9C029 511 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 EPHX3Q9H6B9 360 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 MTRF1LQ9UGC7 380 aaKnown RBP17.07■□□□□ 0.32
CBX4-204ENST00000495122 TUBGCP4Q9UGJ1 667 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 NR2E1Q9Y466 385 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 TRIP11Q15643 1979 aa17.07■□□□□ 0.32
CBX4-204ENST00000495122 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ESYT3A0FGR9 886 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ZSCAN5CA6NGD5 496 aaPredicted RBP17.06■□□□□ 0.32
CBX4-204ENST00000495122 H3BQF6 201 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 TJP3O95049 919 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ERBB2P04626 1255 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 SKIP12755 728 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 COL9A1P20849 921 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 PCK1P35558 622 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 IRS1P35568 1242 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 TAS2R40P59535 323 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 RPL7AP62424 266 aaKnown RBP17.06■□□□□ 0.32
CBX4-204ENST00000495122 CAV1Q03135 178 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 DLX2Q07687 328 aaPredicted RBP17.06■□□□□ 0.32
CBX4-204ENST00000495122 PKDCCQ504Y2 493 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ODF2Q5BJF6 829 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ARCQ7LC44 396 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 IQCKQ8N0W5 287 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 SMG8Q8ND04 991 aaKnown RBP17.06■□□□□ 0.32
CBX4-204ENST00000495122 BBOF1Q8ND07 529 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ATL2Q8NHH9 583 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 TNIP3Q96KP6 325 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 CPXM1Q96SM3 734 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 FMO2Q99518 471 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 C1QTNF1Q9BXJ1 281 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 CWH43Q9H720 699 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 ASNSD1Q9NWL6 643 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 PSD3Q9NYI0 1048 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 HMGXB4Q9UGU5 601 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 RAPGEFL1Q9UHV5 662 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 TSPAN16Q9UKR8 245 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 GIT1Q9Y2X7 761 aa17.06■□□□□ 0.32
CBX4-204ENST00000495122 MTCL1Q9Y4B5 1905 aaKnown RBP17.06■□□□□ 0.32
CBX4-204ENST00000495122 PLXNA3P51805 1871 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 KPNA7A9QM74 516 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 DPYSL4O14531 572 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 LINC01565O15544 149 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 DAPK3O43293 454 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
CBX4-204ENST00000495122 PSMA2P25787 234 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 ACADSBP45954 432 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 UBE3AQ05086 875 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 ZNF252P-AS1Q0IIN9 211 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
CBX4-204ENST00000495122 MRPL10Q7Z7H8 261 aaKnown RBP17.05■□□□□ 0.32
CBX4-204ENST00000495122 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 ECHDC2Q86YB7 292 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 CPNE8Q86YQ8 564 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 APPL2Q8NEU8 664 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 PPP1R10Q96QC0 940 aaKnown RBP17.05■□□□□ 0.32
CBX4-204ENST00000495122 SLC4A5Q9BY07 1137 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 DCLK3Q9C098 648 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 AAASQ9NRG9 546 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 WHRNQ9P202 907 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 CYTH4Q9UIA0 394 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 PCDHB12Q9Y5F1 795 aa17.05■□□□□ 0.32
CBX4-204ENST00000495122 HOXA2O43364 376 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 HUS1O60921 280 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 ZNF623O75123 536 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 PPFIA2O75334 1257 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 RNF8O76064 485 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 SYF2O95926 243 aaKnown RBP17.04■□□□□ 0.32
CBX4-204ENST00000495122 KRT1P04264 644 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 LAG3P18627 525 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 RPL34P49207 117 aaKnown RBP17.04■□□□□ 0.32
CBX4-204ENST00000495122 ZNF143P52747 638 aaPredicted RBP17.04■□□□□ 0.32
CBX4-204ENST00000495122 BCAT1P54687 386 aa17.04■□□□□ 0.32
CBX4-204ENST00000495122 EIF3BP55884 814 aaKnown RBP17.04■□□□□ 0.32
CBX4-204ENST00000495122 MRPS25P82663 173 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms