RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF667Q5HYK9 610 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 TCEAL6Q6IPX3 200 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 RHBDF2Q6PJF5 856 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 CEP57L1Q8IYX8 460 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 CCDC33Q8N5R6 958 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 TCEAL3Q969E4 200 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 CNOT6LQ96LI5 555 aaKnown RBP23.45■■□□□ 1.34
HDDC3-203ENST00000494993 KCNK16Q96T55 309 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 INVSQ9Y283 1065 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 PI4KAP42356 2102 aa23.45■■□□□ 1.34
HDDC3-203ENST00000494993 BCLAF3A2AJT9 711 aaKnown RBP23.44■■□□□ 1.34
HDDC3-203ENST00000494993 KLRC4O43908 158 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 CLSTN1O94985 981 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 ADH1CP00326 375 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 CLDN10P78369 228 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 NCOA4Q13772 614 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 CRY1Q16526 586 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 PMS2CLQ68D20 193 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 ATL3Q6DD88 541 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 ANO7Q6IWH7 933 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 SCARA5Q6ZMJ2 495 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 PAQR9Q6ZVX9 377 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 C11orf74Q86VG3 221 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 C12orf40Q86WS4 652 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 TNIP3Q96KP6 325 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 PNKPQ96T60 521 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 MED10Q9BTT4 135 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 DMAC2Q9NW81 257 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 TBC1D14Q9P2M4 693 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 SERTAD1Q9UHV2 236 aa23.44■■□□□ 1.34
HDDC3-203ENST00000494993 E2F8A0AVK6 867 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 TNFRSF10BO14763 440 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 COCHO43405 550 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 KAT7O95251 611 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 VNN1O95497 513 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 CAVIN2O95810 425 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 C4BPAP04003 597 aaKnown RBP23.43■■□□□ 1.34
HDDC3-203ENST00000494993 APODP05090 189 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 ADH5P11766 374 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SLC5A3P53794 718 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 MESP2Q0VG99 397 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 HECTD3Q5T447 861 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 RNF43Q68DV7 783 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SFTPA1Q8IWL2 248 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 KIAA0895Q8NCT3 520 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 MDGA1Q8NFP4 955 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SCAMP5Q8TAC9 235 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 ELMO3Q96BJ8 720 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SMARCD1Q96GM5 515 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 ZFRQ96KR1 1074 aaKnown RBP23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SDCBP2Q9H190 292 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 DMAP1Q9NPF5 467 aaPredicted RBP23.43■■□□□ 1.34
HDDC3-203ENST00000494993 IL37Q9NZH6 218 aa23.43■■□□□ 1.34
HDDC3-203ENST00000494993 CHORDC1Q9UHD1 332 aaPredicted RBP23.43■■□□□ 1.34
HDDC3-203ENST00000494993 SLFN14P0C7P3 912 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 CHRM1P11229 460 aaPredicted RBP23.42■■□□□ 1.34
HDDC3-203ENST00000494993 STK4Q13043 487 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 SNX30Q5VWJ9 437 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 TMEM92Q6UXU6 159 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 SLC9A9Q8IVB4 645 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 TMEM174Q8WUU8 243 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 OTUB2Q96DC9 234 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 EDEM2Q9BV94 578 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 EXOC1Q9NV70 894 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 CFAP45Q9UL16 551 aa23.42■■□□□ 1.34
HDDC3-203ENST00000494993 GON4LQ3T8J9 2241 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 A0A0A0MRY4 1105 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 ACTN4O43707 911 aaKnown RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 AP1G2O75843 785 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 HSP90AA1P07900 732 aaKnown RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 HNRNPLP14866 589 aaKnown RBP eCLIP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 BCKDHBP21953 392 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 TIE1P35590 1138 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 TUBP50607 506 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 KDSRQ06136 332 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 HSF5Q4G112 596 aaPredicted RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 LY6G5CQ5SRR4 150 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 N4BP2L1Q5TBK1 243 aaPredicted RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 ACOT1Q86TX2 421 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 HSCBQ8IWL3 235 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 FUKQ8N0W3 1084 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 ALLCQ8N6M5 410 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 IL17RCQ8NAC3 791 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 TXNDC5Q8NBS9 432 aaKnown RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 LSM14BQ9BX40 385 aaKnown RBP23.41■■□□□ 1.34
HDDC3-203ENST00000494993 KCTD10Q9H3F6 313 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 CCSER2Q9H7U1 834 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 ARHGEF4Q9NR80 690 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 COMMD8Q9NX08 183 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 GMIPQ9P107 970 aa23.41■■□□□ 1.34
HDDC3-203ENST00000494993 FAM92AA1XBS5 289 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.4■■□□□ 1.34
HDDC3-203ENST00000494993 ALDH1A2O94788 518 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 KLF8O95600 359 aaPredicted RBP23.4■■□□□ 1.34
HDDC3-203ENST00000494993 ZDHHC11BP0C7U3 371 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 GRIA2P42262 883 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 KIR2DL1P43626 348 aaPredicted RBP23.4■■□□□ 1.34
HDDC3-203ENST00000494993 DLG4P78352 724 aa23.4■■□□□ 1.34
HDDC3-203ENST00000494993 DNM1Q05193 864 aaKnown RBP23.4■■□□□ 1.34
HDDC3-203ENST00000494993 GAD2Q05329 585 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms