RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ENOSF1Q7L5Y1 443 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 RALGPS2Q86X27 583 aaPredicted RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 DDX42Q86XP3 938 aaKnown RBP eCLIP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 IRF2BP1Q8IU81 584 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 CCDC105Q8IYK2 499 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 KIAA1958Q8N8K9 716 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 ANKRD52Q8NB46 1076 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 TTC8Q8TAM2 541 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 LMO3Q8TAP4 145 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 SH3RF2Q8TEC5 729 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 FAM122AQ96E09 287 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 ZFYVE19Q96K21 471 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MED15Q96RN5 788 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 SLC22A12Q96S37 553 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 FAM83CQ9BQN1 747 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 FOXQ1Q9C009 403 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 NACA2Q9H009 215 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 RNF38Q9H0F5 515 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 INTS2Q9H0H0 1204 aaKnown RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 LTB4R2Q9NPC1 389 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 DUS2Q9NX74 493 aaKnown RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 HESX1Q9UBX0 185 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 SCML2Q9UQR0 700 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 CCL26Q9Y258 94 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 TICRRQ7Z2Z1 1910 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 KMT2EQ8IZD2 1858 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 GTPBP10A4D1E9 387 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 HHLA1C9JL84 531 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 SPECC1L-ADORA2AF8WAN1 911 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 H0Y858 1186 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 LEFTY2O00292 366 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 SLC9A3R1O14745 358 aaPredicted RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 COCHO43405 550 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 OLFM2O95897 454 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 OAS1P00973 400 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ZDHHC11BP0C7U3 371 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ATP5C1P36542 298 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 IFNAR2P48551 515 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TUBP50607 506 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 BCAT1P54687 386 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 STILQ15468 1287 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ZNF77Q15935 545 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 CNGA2Q16280 664 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 MAN2A1Q16706 1144 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 GOLGA7BQ2TAP0 167 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 VWA3BQ502W6 1294 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 CCDC183Q5T5S1 534 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 RBM43Q6ZSC3 357 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TADA2BQ86TJ2 420 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ARHGEF19Q8IW93 802 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ARHGAP18Q8N392 663 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 CPA6Q8N4T0 437 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 UBR7Q8N806 425 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 PRSS33Q8NF86 280 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ENOX1Q8TC92 643 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 OSCP1Q8WVF1 389 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ATOH1Q92858 354 aaPredicted RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ATP2A3Q93084 1043 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 CLDN23Q96B33 292 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TUBGCP2Q9BSJ2 902 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 NDST4Q9H3R1 872 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 EBF3Q9H4W6 596 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 LMAN1LQ9HAT1 526 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 LRRC4Q9HBW1 653 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 UBE2TQ9NPD8 197 aaPredicted RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ANO10Q9NW15 660 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 GTSE1Q9NYZ3 720 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 GMIPQ9P107 970 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TBC1D14Q9P2M4 693 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TSPAN16Q9UKR8 245 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 NDRG2Q9UN36 371 aaKnown RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 SH3BP1Q9Y3L3 701 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 MTF2Q9Y483 593 aaPredicted RBP7.36□□□□□ -1.23
TOP3A-207ENST00000493648 CPQQ9Y646 472 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 TRIOO75962 3097 aa7.36□□□□□ -1.23
TOP3A-207ENST00000493648 ZNF318Q5VUA4 2279 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 MIA3Q5JRA6 1907 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 E2F8A0AVK6 867 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 KCNJ18B7U540 433 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 RNF225M0QZC1 329 aaPredicted RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 PES1O00541 588 aaKnown RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 XPO1O14980 1071 aaKnown RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 NFATC1O95644 943 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 ZBED1O96006 694 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 TPM2P07951 284 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 SETSIPP0DME0 302 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 RALAP11233 206 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 RARGP13631 454 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 KRT5P13647 590 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 SLC9A1P19634 815 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 TARSP26639 723 aaKnown RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 EEF1GP26641 437 aaKnown RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 PON1P27169 355 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 CTHP32929 405 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 PLA2G5P39877 138 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 RPS9P46781 194 aaKnown RBP7.35□□□□□ -1.23
TOP3A-207ENST00000493648 PLA2G4AP47712 749 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 TKTL1P51854 596 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 KIF11P52732 1056 aa7.35□□□□□ -1.23
TOP3A-207ENST00000493648 TNK2Q07912 1038 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms