RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SLC44A3Q8N4M1 653 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 PKMYT1Q99640 499 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
MSH6-208ENST00000493177 PRRX2Q99811 253 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 KXD1Q9BQD3 176 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 KRT82Q9NSB4 513 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 ADAMTS1Q9UHI8 967 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 ARIH1Q9Y4X5 557 aaPredicted RBP14.17□□□□□ -0.14
MSH6-208ENST00000493177 MUC3AQ02505 3323 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 TMCO5BA8MYB1 307 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 CEBPBP17676 345 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 FECHP22830 423 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 BDNFP23560 247 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 AVPR2P30518 371 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 PLA2G5P39877 138 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 BCAT1P54687 386 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 VCPP55072 806 aaKnown RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 GFPT1Q06210 699 aaPredicted RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 SMARCB1Q12824 385 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 SLC5A9Q2M3M2 681 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 TMEM139Q8IV31 216 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 CCDC170Q8IYT3 715 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 TMEM35BQ8NCS4 154 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 C1orf131Q8NDD1 294 aaKnown RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 C2orf15Q8WU43 125 aaKnown RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 FGF14Q92915 247 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 SMARCD1Q96GM5 515 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 PCDHB18PQ96TA0 734 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 SPTLC3Q9NUV7 552 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 GDE1Q9NZC3 331 aa14.16□□□□□ -0.14
MSH6-208ENST00000493177 ZNF638Q14966 1978 aaKnown RBP14.16□□□□□ -0.14
MSH6-208ENST00000493177 ANHXE9PGG2 379 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 DDX3XO00571 662 aaKnown RBP eCLIP14.15□□□□□ -0.147e-19■■■■■ 42.4
MSH6-208ENST00000493177 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 IPO7O95373 1038 aaKnown RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 CYP2F1P24903 491 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 ANXA13P27216 316 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 GRIK1P39086 918 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 TUFMP49411 452 aaKnown RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 MAP3K7CLP57077 242 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 CCZ1BP86790 482 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 CCZ1P86791 482 aaPredicted RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 BST2Q10589 180 aaKnown RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 MTF1Q14872 753 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 CLEC16AQ2KHT3 1053 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 CCDC122Q5T0U0 273 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 NAA35Q5VZE5 725 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 PAQR9Q6ZVX9 377 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 TTC30AQ86WT1 665 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 SCN4BQ8IWT1 228 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 ANKRD52Q8NB46 1076 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 ATAD1Q8NBU5 361 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 SPPL2BQ8TCT7 592 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 GPR152Q8TDT2 470 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 TCEAL4Q96EI5 215 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 GCNAQ96QF7 691 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 SYT11Q9BT88 431 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 AVENQ9NQS1 362 aaPredicted RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 WNT16Q9UBV4 365 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 EPN1Q9Y6I3 576 aaPredicted RBP14.15□□□□□ -0.14
MSH6-208ENST00000493177 MIA3Q5JRA6 1907 aa14.15□□□□□ -0.14
MSH6-208ENST00000493177 A0A087X0T9 212 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 SOAT2O75908 522 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 LSM8O95777 96 aaKnown RBP14.14□□□□□ -0.15
MSH6-208ENST00000493177 FAM228BP0C875 321 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 GJA1P17302 382 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 NPR3P17342 541 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 NSFP46459 744 aaKnown RBP14.14□□□□□ -0.15
MSH6-208ENST00000493177 PDE4CQ08493 712 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 SPA17Q15506 151 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 SLC18A3Q16572 532 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 ARHGAP15Q53QZ3 475 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 ASTLQ6HA08 431 aaPredicted RBP14.14□□□□□ -0.15
MSH6-208ENST00000493177 TTC9BQ8N6N2 239 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 CPA5Q8WXQ8 436 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 FUBP3Q96I24 572 aaKnown RBP eCLIP14.14□□□□□ -0.15
MSH6-208ENST00000493177 NOX5Q96PH1 765 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 LHX5Q9H2C1 402 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 KCNF1Q9H3M0 494 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 DMAP1Q9NPF5 467 aaPredicted RBP14.14□□□□□ -0.15
MSH6-208ENST00000493177 ST7Q9NRC1 585 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 ASB3Q9Y575 518 aa14.14□□□□□ -0.15
MSH6-208ENST00000493177 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
MSH6-208ENST00000493177 A0A1W2PRU2 124 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 TRIM66O15016 1216 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 NDUFA10O95299 355 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 FGF19O95750 216 aa14.13□□□□□ -0.15
MSH6-208ENST00000493177 CYP1A1P04798 512 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms