RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SYT15Q9BQS2 421 aa14.7□□□□□ -0.06
PTPN7-216ENST00000492977 B3GNT5Q9BYG0 378 aa14.7□□□□□ -0.06
PTPN7-216ENST00000492977 CACNG4Q9UBN1 327 aa14.7□□□□□ -0.06
PTPN7-216ENST00000492977 ADAM21Q9UKJ8 722 aa14.7□□□□□ -0.06
PTPN7-216ENST00000492977 TDRD15B5MCY1 1934 aaKnown RBP14.7□□□□□ -0.06
PTPN7-216ENST00000492977 FRMPD3Q5JV73 1810 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ARHGEF37A1IGU5 675 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 C19orf67A6NJJ6 358 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 H0YGN5 161 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 POMCP01189 267 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ITGAVP06756 1048 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ODC1P11926 461 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 LCP1P13796 627 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ATF2P15336 505 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PCSK1P29120 753 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ADCY8P40145 1251 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 MLLT3P42568 568 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 VCPP55072 806 aaKnown RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PDK2Q15119 407 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 TIGD5Q53EQ6 642 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 SH3PXD2AQ5TCZ1 1133 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 FAM43BQ6ZT52 329 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PAQR9Q6ZVX9 377 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 CYP4V2Q6ZWL3 525 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 SLC24A5Q71RS6 500 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 GSTA5Q7RTV2 222 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PIGZQ86VD9 579 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 MAP7D3Q8IWC1 876 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 FAM172AQ8WUF8 416 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 HSPH1Q92598 858 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 CENPIQ92674 756 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PEBP4Q96S96 227 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 MED10Q9BTT4 135 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 DDX23Q9BUQ8 820 aaKnown RBP14.69□□□□□ -0.06
PTPN7-216ENST00000492977 CRTAC1Q9NQ79 661 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 DSEQ9UL01 958 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 DNPEPQ9ULA0 475 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ZNF148Q9UQR1 794 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 ATP8A1Q9Y2Q0 1164 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 NFS1Q9Y697 457 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 PTCH2Q9Y6C5 1203 aa14.69□□□□□ -0.06
PTPN7-216ENST00000492977 C9IYK1 514 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CST8O60676 142 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 B3GAT3O94766 335 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 KRT14P02533 472 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CYP11A1P05108 521 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 KLRC2P26717 231 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 ARSEP51690 589 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 PMS2P54278 862 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 FAM189BP81408 668 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 ATP11AP98196 1134 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 OASLQ15646 514 aaKnown RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CDO1Q16878 200 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 KIAA0319Q5VV43 1072 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 DCLRE1AQ6PJP8 1040 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 METTL23Q86XA0 190 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 ALLCQ8N6M5 410 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 EXOC4Q96A65 974 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 FAM118BQ9BPY3 351 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 PAAF1Q9BRP4 392 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 C11orf84Q9BUA3 381 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 MAK16Q9BXY0 300 aaKnown RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 PABPC3Q9H361 631 aaKnown RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 NGRNQ9NPE2 291 aaKnown RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 GOLGA6CA6NDK9 693 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 M0QZQ0 153 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CLDN5O00501 218 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 MDM4O15151 490 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 TP73O15350 636 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CD48P09326 243 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 GOLGA6DP0CG33 693 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 RARGP13631 454 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CDH6P55285 790 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 EIF3BP55884 814 aaKnown RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 TFDP2Q14188 446 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 MBTPS1Q14703 1052 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 RHBDF2Q6PJF5 856 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 GLB1LQ6UWU2 654 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CLEC20AQ6ZU45 233 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 RTN4RL1Q86UN2 441 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 RFX6Q8HWS3 928 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 MYCBPAPQ8TBZ2 947 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CLEC4CQ8WTT0 213 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 ACBD6Q9BR61 282 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 FTHL17Q9BXU8 183 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 LRRC4Q9HBW1 653 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 GOLGA6AQ9NYA3 693 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN7-216ENST00000492977 ANAPC5Q9UJX4 755 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 INPP5FQ9Y2H2 1132 aa14.68□□□□□ -0.06
PTPN7-216ENST00000492977 GOLGA6L10A6NI86 522 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 ZNF487B1APH4 448 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms