RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	DKK4	Q9UBT3	224 aa		20.56	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ITGA11	Q9UKX5	1188 aa		20.56	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SCAMP3	O14828	347 aa	Known RBP	20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	OLFM2	O95897	454 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	KRT19	P08727	400 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	HOXB2	P14652	356 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	NTSR1	P30989	418 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	RBP5	P82980	135 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	RILPL1	Q5EBL4	403 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	WDR45B	Q5MNZ6	344 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ARL6IP4	Q66PJ3	421 aa	Known RBP	20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SLCO6A1	Q86UG4	719 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	PHTF2	Q8N3S3	785 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CDH9	Q9ULB4	789 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	R3HCC1	Q9Y3T6	440 aa	Known RBP	20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CELSR3	Q9NYQ7	3312 aa		20.55	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	PCDH15	Q96QU1	1955 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	E2F8	A0AVK6	867 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	TRIM66	O15016	1216 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ATP2C2	O75185	946 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ADSS	P30520	456 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	UBA7	P41226	1012 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SOWAHA	Q2M3V2	549 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	TDRD10	Q5VZ19	366 aa	Known RBP	20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	NAT16	Q8N8M0	369 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	AK8	Q96MA6	479 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SYT15	Q9BQS2	421 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	FAM213A	Q9BRX8	229 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CYP8B1	Q9UNU6	501 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CEP192	Q8TEP8	1941 aa		20.54	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	HCRT	O43612	131 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	LDHA	P00338	332 aa	Known RBP	20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	OAS1	P00973	400 aa	Known RBP	20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	MBL2	P11226	248 aa	Predicted RBP	20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	NOP14	P78316	857 aa	Known RBP	20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CYP27A1	Q02318	531 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	C19orf57	Q0VDD7	668 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	MYO1E	Q12965	1108 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	C10orf76	Q5T2E6	689 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	TMPRSS7	Q7RTY8	843 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ZNF720	Q7Z2F6	126 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	MYLPF	Q96A32	169 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SLITRK1	Q96PX8	696 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	PCOLCE2	Q9UKZ9	415 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	STARD13	Q9Y3M8	1113 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	MYOF	Q9NZM1	2061 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	PLXNB3	Q9ULL4	1909 aa		20.53	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CBFA2T3	O75081	653 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	TULP3	O75386	442 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	LMO2	P25791	158 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	WAS	P42768	502 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	TAF10	Q12962	218 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	MCM6	Q14566	821 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	BRSK2	Q8IWQ3	736 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ETFBKMT	Q8IXQ9	262 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	KRI1	Q8N9T8	703 aa	Known RBP	20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	CXorf38	Q8TB03	319 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	SETD7	Q8WTS6	366 aa	Known RBP	20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	HVCN1	Q96D96	273 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	ZSCAN31	Q96LW9	406 aa	Predicted RBP	20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	EXOC7	Q9UPT5	735 aa		20.52	■□□□□ 0.88
CDK5RAP2-218	ENST00000491334	HELZ	P42694	1942 aa	Known RBP	20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334		A0A1W2PQF6	199 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	HOXC11	O43248	304 aa	Predicted RBP	20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PDGFRB	P09619	1106 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	WNT7B	P56706	349 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	PSMC1	P62191	440 aa	Known RBP	20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GRIK2	Q13002	908 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CHPF	Q8IZ52	775 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TERB1	Q8NA31	727 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ADAM32	Q8TC27	787 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	IPO4	Q8TEX9	1081 aa	Known RBP	20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	C8orf48	Q96LL4	319 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	IKZF4	Q9H2S9	585 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CRTAC1	Q9NQ79	661 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	BLOC1S4	Q9NUP1	217 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CACNA2D2	Q9NY47	1150 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	RBAK	Q9NYW8	714 aa	Predicted RBP	20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SH3BP1	Q9Y3L3	701 aa		20.51	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	BPTF	Q12830	3046 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	NDUFV2	P19404	249 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MAOB	P27338	520 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	ANO4	Q32M45	955 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MCTP1	Q6DN14	999 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	RASSF8	Q8NHQ8	419 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MYCBPAP	Q8TBZ2	947 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	RAD54L	Q92698	747 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	KIF2C	Q99661	725 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CDC6	Q99741	560 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SPHK2	Q9NRA0	654 aa		20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GOLGA4	Q13439	2230 aa	Known RBP	20.5	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334		A0A1B0GTW7	788 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334		F8VP50	259 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	TMEM191B	P0C7N4	346 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	CYP4F3	Q08477	520 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SCARA3	Q6AZY7	606 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	LIMS2	Q7Z4I7	341 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	MIB1	Q86YT6	1006 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	SCUBE3	Q8IX30	993 aa		20.49	■□□□□ 0.87
CDK5RAP2-218	ENST00000491334	GALNT15	Q8N3T1	639 aa		20.49	■□□□□ 0.87

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms