RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PSTPIP1O43586 416 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 RNF8O76064 485 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 PGFP49763 221 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 DDR2Q16832 855 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
SMPD4-219ENST00000491128 PRSS55Q6UWB4 352 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-219ENST00000491128 NECAB2Q7Z6G3 386 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 DEFB106AQ8N104 65 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 THEM5Q8N1Q8 247 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 ATAD1Q8NBU5 361 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 LRRN4Q8WUT4 740 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 OSBPL8Q9BZF1 889 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 ELAC1Q9H777 363 aaKnown RBP14.59□□□□□ -0.07
SMPD4-219ENST00000491128 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 MAP3K6O95382 1288 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 SDC4P31431 198 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 ITIH3Q06033 890 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 TRIP13Q15645 432 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-219ENST00000491128 CA9Q16790 459 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 FAM171BQ6P995 826 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 KATNAL2Q8IYT4 538 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 SLITRK1Q96PX8 696 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 PKMYT1Q99640 499 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 CALN1Q9BXU9 219 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 NUDT5Q9UKK9 219 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-219ENST00000491128 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 SLC27A5Q9Y2P5 690 aa14.59□□□□□ -0.07
SMPD4-219ENST00000491128 MAN1A1P33908 653 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 GRIK1P39086 918 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC33Q8N5R6 958 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 STK32AQ8WU08 396 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 TBCBQ99426 244 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CNPY3Q9BT09 278 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 ASNSD1Q9NWL6 643 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 RAB21Q9UL25 225 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 NFU1Q9UMS0 254 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 MRPL42Q9Y6G3 142 aaKnown RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 HHLA1C9JL84 531 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 TRUB2O95900 331 aaKnown RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 HDAC4P56524 1084 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 GSCP56915 257 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 MRPS5P82675 430 aaKnown RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 TSPY1Q01534 308 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 NME3Q13232 169 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CTXN3Q4LDR2 81 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC137Q6PK04 289 aaKnown RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 FAM131BQ86XD5 332 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 SPATA2LQ8IUW3 424 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-219ENST00000491128 KCTD6Q8NC69 237 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 SMARCD1Q96GM5 515 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 HSFY1Q96LI6 401 aa14.58□□□□□ -0.08
SMPD4-219ENST00000491128 SASH3O75995 380 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 TIMP1P01033 207 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 SYN1P17600 705 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC70Q6NSX1 233 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 CNKSR3Q6P9H4 555 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC105Q8IYK2 499 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 NETO2Q8NC67 525 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 MCOLN1Q9GZU1 580 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 ARGLU1Q9NWB6 273 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-219ENST00000491128 GOLGA6L10A0A0M3HER8 536 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 FSCN2O14926 492 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 ADAM12O43184 909 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 DAPK3O43293 454 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 FAM153BP0C7A2 387 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 VPS41P49754 854 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 DR1Q01658 176 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 FAM153CQ494X1 144 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 PPP6R3Q5H9R7 873 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-219ENST00000491128 CCNI2Q6ZMN8 369 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-219ENST00000491128 PYROXD2Q8N2H3 581 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 EXD1Q8NHP7 514 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 FNIP1Q8TF40 1166 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 DSEQ9UL01 958 aa14.57□□□□□ -0.08
SMPD4-219ENST00000491128 C3orf70A6NLC5 250 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 DGKIO75912 1065 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 FYNP06241 537 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 ALDH7A1P49419 539 aaKnown RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 YWHAZP63104 245 aaKnown RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 PKN2Q16513 984 aaKnown RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 SLC26A9Q7LBE3 791 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC185Q8N715 623 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 NAP1L3Q99457 506 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-219ENST00000491128 DNAI2Q9GZS0 605 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 NEUROG2Q9H2A3 272 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 CRISPLD1Q9H336 500 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 CCDC188H7C350 402 aa14.56□□□□□ -0.08
SMPD4-219ENST00000491128 TRAPPC3O43617 180 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms