RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ZNF200P98182 395 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 MSLNQ13421 630 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 TBCCQ15814 346 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 KBTBD12Q3ZCT8 623 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 WDR44Q5JSH3 913 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 LDHDQ86WU2 507 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 SHKBP1Q8TBC3 707 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 CHURC1Q8WUH1 139 aa20.15■□□□□ 0.82
SNAPC3-206ENST00000490969 TCRBV9S1A1TA0A576 114 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 ZNF862O60290 1169 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 ACO1P21399 889 aaKnown RBP20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 RPL22P35268 128 aaKnown RBP20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 SPOPLQ6IQ16 392 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 RNF111Q6ZNA4 994 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 C15orf39Q6ZRI6 1047 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 IGDCC3Q8IVU1 814 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 ZNF516Q92618 1163 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 C17orf75Q9HAS0 396 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 XPO7Q9UIA9 1087 aaKnown RBP20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.82
SNAPC3-206ENST00000490969 MEI4A8MW99 385 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 PTPRAP18433 802 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 USP46P62068 366 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 DYNLT1P63172 113 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 PDE1BQ01064 536 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 HIC1Q14526 733 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 EFHC1Q5JVL4 640 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 LPCAT4Q643R3 524 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 LMBRD2Q68DH5 695 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 TRIM42Q8IWZ5 723 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 CPXCR1Q8N123 301 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 ACTL9Q8TC94 416 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 NMD3Q96D46 503 aaKnown RBP20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 KLHL4Q9C0H6 718 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 DNAAF2Q9NVR5 837 aaKnown RBP20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 MARCOQ9UEW3 520 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 FEM1BQ9UK73 627 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 SOX13Q9UN79 622 aa20.14■□□□□ 0.81
SNAPC3-206ENST00000490969 ATP9BO43861 1147 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 OR6B1O95007 311 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 KITP10721 976 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 VCLP18206 1134 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 CPOXP36551 454 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 NPTX2P47972 431 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 AQP4P55087 323 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 OTUD4Q01804 1114 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 ATG16L1Q676U5 607 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 TMEM270Q6UE05 265 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 GPD1LQ8N335 351 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 E2F7Q96AV8 911 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 MPP4Q96JB8 637 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 ZNF395Q9H8N7 513 aaPredicted RBP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 KCNH7Q9NS40 1196 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 CLIC5Q9NZA1 410 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 PCDHB4Q9Y5E5 795 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 ELK3P41970 407 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 DLG1Q12959 904 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 CES4AQ5XG92 561 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 LENG1Q96BZ8 264 aaPredicted RBP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 KLRG1Q96E93 195 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 MCEEQ96PE7 176 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 EPB41L1Q9H4G0 881 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 DDX56Q9NY93 547 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 NDUFA13Q9P0J0 144 aa20.13■□□□□ 0.81
SNAPC3-206ENST00000490969 ARHGAP42A6NI28 874 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 DHX15O43143 795 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 ITGA2BP08514 1039 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 FAM200BP0CF97 657 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 IMPDH2P12268 514 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 XIAPP98170 497 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 UBAP2LQ14157 1087 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 TTLL12Q14166 644 aaPredicted RBP20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 RSAD2Q8WXG1 361 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 FAM213AQ9BRX8 229 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 ADAMTS6Q9UKP5 1117 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 DOCK1Q14185 1865 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 CCDC195A0A1B0GUA6 201 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 NFIBO00712 420 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 LYPLA2O95372 231 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 HLA-DRAP01903 254 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 SERPINA6P08185 405 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 SCNN1BP51168 640 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 OGDHQ02218 1023 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 CDK18Q07002 472 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 CHI3L2Q15782 390 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 RILPQ96NA2 401 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 RAVER2Q9HCJ3 691 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 PLLPQ9Y342 182 aa20.12■□□□□ 0.81
SNAPC3-206ENST00000490969 TRIM49D1C9J1S8 452 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 KBTBD13C9JR72 458 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 MMP8P22894 467 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 PEX2P28328 305 aa20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 DMP1Q13316 513 aaPredicted RBP20.11■□□□□ 0.81
SNAPC3-206ENST00000490969 PDK3Q15120 406 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms