RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 ADAMTS18Q8TE60 1221 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 FYTTD1Q96QD9 318 aaKnown RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 MMS19Q96T76 1030 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 TMEM79Q9BSE2 394 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 VN1R3Q9BXE9 311 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 DHX36Q9H2U1 1008 aaKnown RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 TRIM36Q9NQ86 728 aa4.67□□□□□ -1.66
HMGN1-218ENST00000490032 TUBA8Q9NY65 449 aaPredicted RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 NOB1Q9ULX3 412 aaKnown RBP4.67□□□□□ -1.66
HMGN1-218ENST00000490032 CFAP69A5D8W1 941 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 A6NNZ2 444 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 CES2O00748 559 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 PPEF2O14830 753 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 SRGAP2O75044 1071 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 ARHGAP25P42331 645 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 TIRAPP58753 221 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 LMAN2Q12907 356 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 MAPK7Q13164 816 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 LRRC41Q15345 812 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 NPY5RQ15761 445 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 C4orf46Q504U0 113 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 MEX3CQ5U5Q3 659 aaKnown RBP4.66□□□□□ -1.66
HMGN1-218ENST00000490032 MIS18BP1Q6P0N0 1132 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 FAM204AQ9H8W3 233 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 SACM1LQ9NTJ5 587 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 GAR1Q9NY12 217 aaKnown RBP4.66□□□□□ -1.66
HMGN1-218ENST00000490032 AFF4Q9UHB7 1163 aaKnown RBP4.66□□□□□ -1.66
HMGN1-218ENST00000490032 TPCN1Q9ULQ1 816 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 SCAF8Q9UPN6 1271 aaKnown RBP4.66□□□□□ -1.66
HMGN1-218ENST00000490032 USP22Q9UPT9 525 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 ZNF521Q96K83 1311 aa4.66□□□□□ -1.66
HMGN1-218ENST00000490032 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.67
HMGN1-218ENST00000490032 PROB1E7EW31 1015 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 H7C4K7 107 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 FCHO1O14526 889 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 RRP9O43818 475 aaKnown RBP4.65□□□□□ -1.67
HMGN1-218ENST00000490032 MT-CO3P00414 261 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 HRGP04196 525 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 A1BGP04217 495 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 BRAFP15056 766 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 PHKG2P15735 406 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 MMP13P45452 471 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 CACNB3P54284 484 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 ARHGEF7Q14155 803 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 PPP2R5AQ15172 486 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 TRIP6Q15654 476 aaKnown RBP4.65□□□□□ -1.67
HMGN1-218ENST00000490032 CNGA2Q16280 664 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 TMEM63BQ5T3F8 832 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 KCTD20Q7Z5Y7 419 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 KRT73Q86Y46 540 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 FAM118BQ9BPY3 351 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 VPS16Q9H269 839 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 COL20A1Q9P218 1284 aa4.65□□□□□ -1.67
HMGN1-218ENST00000490032 TMEM232C9JQI7 657 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 SPRY2O43597 315 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 RASAL1O95294 804 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 IGKV2-30P06310 120 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 APEHP13798 732 aaKnown RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 IL1R1P14778 569 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 ATP5F1P24539 256 aaPredicted RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 PTDSS1P48651 473 aaKnown RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 DIO1P49895 249 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 FMO1Q01740 532 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 LAMB3Q13751 1172 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 ARHGAP29Q52LW3 1261 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 CACHD1Q5VU97 1274 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 DENND2CQ68D51 928 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 CHST15Q7LFX5 561 aaPredicted RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 CNGA4Q8IV77 575 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 PIGOQ8TEQ8 1089 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 PNISRQ8TF01 805 aaKnown RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 APIPQ96GX9 242 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 WDYHV1Q96HA8 205 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 CCDC17Q96LX7 622 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 SPRTNQ9H040 489 aaPredicted RBP4.64□□□□□ -1.67
HMGN1-218ENST00000490032 SNX15Q9NRS6 342 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 ELOVL5Q9NYP7 299 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 KLHL13Q9P2N7 655 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 EID1Q9Y6B2 187 aa4.64□□□□□ -1.67
HMGN1-218ENST00000490032 H3BNC9 293 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 KCNAB3O43448 404 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 RGS10O43665 173 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 TMPRSS11DO60235 418 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 GCATO75600 419 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 RASSF9O75901 435 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 BMP15O95972 392 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 S100BP04271 92 aaPredicted RBP4.63□□□□□ -1.67
HMGN1-218ENST00000490032 TXNP10599 105 aaKnown RBP4.63□□□□□ -1.67
HMGN1-218ENST00000490032 MYF5P13349 255 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 IL1R2P27930 398 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 MTHFSP49914 203 aa4.63□□□□□ -1.67
HMGN1-218ENST00000490032 RPS16P62249 146 aaKnown RBP4.63□□□□□ -1.67
HMGN1-218ENST00000490032 LARS2Q15031 903 aaKnown RBP4.63□□□□□ -1.67
HMGN1-218ENST00000490032 POLD3Q15054 466 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms