RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 OXCT2Q9BYC2 517 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-208ENST00000489537 OSBPL8Q9BZF1 889 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 SENP6Q9GZR1 1112 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-208ENST00000489537 RSAD1Q9HA92 442 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 FAM105AQ9NUU6 356 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF446Q9NWS9 450 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 PSD3Q9NYI0 1048 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 DDX20Q9UHI6 824 aaKnown RBP6.68□□□□□ -1.34
SF3A3-208ENST00000489537 DMGDHQ9UI17 866 aaKnown RBP6.68□□□□□ -1.34
SF3A3-208ENST00000489537 HPCAL4Q9UM19 191 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 IPPQ9Y573 584 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 SNX9Q9Y5X1 595 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 CDY2AQ9Y6F7 541 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 FRMPD3Q5JV73 1810 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 UNC80Q8N2C7 3258 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 VCANP13611 3396 aa6.68□□□□□ -1.34
SF3A3-208ENST00000489537 A0A0U1RQF3 1178 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 TCRBV5S1A1TA0A578 114 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 A8MXQ7 604 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 HMGB1P1B2RPK0 211 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 KBTBD13C9JR72 458 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 INPPL1O15357 1258 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PRPSAP2O60256 369 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 MICAL2O94851 1124 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 MYZAPP0CAP1 466 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PYGMP11217 842 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ODC1P11926 461 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 GPD1P21695 349 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 STIP1P31948 543 aaKnown RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PTPN9P43378 593 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 BEX3Q00994 111 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 SLC6A3Q01959 620 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 GRIK3Q13003 919 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 MTA1Q13330 715 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ITGA7Q13683 1181 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 KCNA10Q16322 511 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PTGISQ16647 500 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF394Q53GI3 561 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 TMEM63BQ5T3F8 832 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ACBD5Q5T8D3 534 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 DUPD1Q68J44 220 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PPP1R21Q6ZMI0 780 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 SCARA5Q6ZMJ2 495 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PDZD4Q76G19 769 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 TRMT10CQ7L0Y3 403 aaKnown RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 JAMLQ86YT9 394 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PASD1Q8IV76 773 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ADGRF2Q8IZF7 708 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 THEM5Q8N1Q8 247 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 URGCPQ8TCY9 931 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 KCTD13Q8WZ19 329 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 APBB2Q92870 758 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 LENG1Q96BZ8 264 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 SNF8Q96H20 258 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 TTC25Q96NG3 672 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 MCEEQ96PE7 176 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 HNRNPABQ99729 332 aaKnown RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 GDF15Q99988 308 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 AP1M1Q9BXS5 423 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 DDX47Q9H0S4 455 aaKnown RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 SMYD3Q9H7B4 428 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 HMX1Q9NP08 348 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 PNPLA8Q9NP80 782 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 ST7Q9NRC1 585 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 RCOR3Q9P2K3 495 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-208ENST00000489537 AMACRQ9UHK6 382 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 TSPAN16Q9UKR8 245 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 STAP1Q9ULZ2 295 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 NFU1Q9UMS0 254 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 KAT6AQ92794 2004 aa6.67□□□□□ -1.34
SF3A3-208ENST00000489537 MCM3APO60318 1980 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SRRM3A6NNA2 597 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 MDM4O15151 490 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ADCY6O43306 1168 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 F9P00740 461 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 KRT1P04264 644 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 IVLP07476 585 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 RARGP13631 454 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ATF2P15336 505 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PDGFRAP16234 1089 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 THPOP40225 353 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 MAGEA10P43363 369 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PLA2G4AP47712 749 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 NR2C2P49116 596 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 RPL34P49207 117 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 LILRA4P59901 499 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 RNASE9P60153 205 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SLC7A5Q01650 507 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SMARCB1Q12824 385 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 TUSC3Q13454 348 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PTK6Q13882 451 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 BYSLQ13895 437 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 FAM102AQ5T9C2 384 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 DCAF12L1Q5VU92 463 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 OR6B2Q6IFH4 312 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms