RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 STX7O15400 261 aaKnown RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 TRIM16LQ309B1 348 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 SLC26A11Q86WA9 606 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 RERGLQ9H628 205 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 C17orf75Q9HAS0 396 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 MT-CO1P00395 513 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 PTPN4P29074 926 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 TRAF7Q6Q0C0 670 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 CCDC103Q8IW40 242 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 ZNF333Q96JL9 665 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 FRMD8P1Q9BZ68 369 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 KRT75O95678 551 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 PTENP60484 403 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 CYP24A1Q07973 514 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 NFIAQ12857 509 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 TBC1D19Q8N5T2 526 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 CEP41Q9BYV8 373 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 PYGMP11217 842 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 GZMAP12544 262 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 SREBF1P36956 1147 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 RPL21P46778 160 aaKnown RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 MYL6P60660 151 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 IFI35P80217 286 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 DGKDQ16760 1214 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 SLFN11Q7Z7L1 901 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 YAF2Q8IY57 180 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 USP6NLQ92738 828 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 CGRRF1Q99675 332 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 PIH1D1Q9NWS0 290 aaKnown RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 PRG3Q9Y2Y8 225 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 CAB39Q9Y376 341 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-209ENST00000489180 SH3BP1Q9Y3L3 701 aa18.19■□□□□ 0.5
NPHP4-209ENST00000489180 VDRP11473 427 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 PPP4CP60510 307 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 PDK2Q15119 407 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 MTFR1Q15390 333 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 STKLD1Q8NE28 680 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CHST13Q8NET6 341 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 EXD1Q8NHP7 514 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 EIF3LQ9Y262 564 aaKnown RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 SERPINI2O75830 405 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 GCLCP48506 637 aaPredicted RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 NFYCQ13952 458 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CRYMQ14894 314 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CCNG2Q16589 344 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 ARHGEF19Q8IW93 802 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 APPL1Q9UKG1 709 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 WBP4O75554 376 aaKnown RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 RDM1Q8NG50 284 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 RPRD1AQ96P16 312 aaPredicted RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 AP4E1Q9UPM8 1137 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CHD1O14646 1710 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 ERCC6L2Q5T890 1561 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 LZTS3O60299 673 aaPredicted RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 H2AFYO75367 372 aaKnown RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 VTNP04004 478 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 SNAPC2Q13487 334 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 LAMC2Q13753 1193 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 BBS7Q8IWZ6 715 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 DDHD1Q8NEL9 900 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 GLMNQ92990 594 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 FICDQ9BVA6 458 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 A0A087X0B3 334 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 PDE5AO76074 875 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CYP2C8P10632 490 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CSHL1Q14406 222 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CENPLQ8N0S6 344 aaPredicted RBP18.18■□□□□ 0.5
NPHP4-209ENST00000489180 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 VPS37AQ8NEZ2 397 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 DEFB129Q9H1M3 183 aa18.18■□□□□ 0.5
NPHP4-209ENST00000489180 C2CD2LO14523 706 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CPA3P15088 417 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 ATP6V1B2P21281 511 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 YY1P25490 414 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 HOXD10P28358 340 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 ZNF844Q08AG5 666 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CCDC15Q0P6D6 951 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 GLB1LQ6UWU2 654 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 MPZL3Q6UWV2 235 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 MIB1Q86YT6 1006 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 DEFB107AQ8IZN7 70 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 DCLK3Q9C098 648 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 LRRC40Q9H9A6 602 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CISHQ9NSE2 258 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
NPHP4-209ENST00000489180 RGS5O15539 181 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 TIMM44O43615 452 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
NPHP4-209ENST00000489180 GMPSP49915 693 aaPredicted RBP18.17■□□□□ 0.5
NPHP4-209ENST00000489180 RAET1EQ8TD07 263 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CATSPER2Q96P56 530 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 TMEM245Q9H330 911 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CAPN10Q9HC96 672 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 GIMAP4Q9NUV9 329 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms