RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GALK1P51570 392 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 SLC7A9P82251 487 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 GRSF1Q12849 480 aaKnown RBP eCLIP14.84□□□□□ -0.03
VTI1A-206ENST00000489142 SRSF5Q13243 272 aaKnown RBP14.84□□□□□ -0.03
VTI1A-206ENST00000489142 LPAL2Q16609 132 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 COBLL1Q53SF7 1204 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 TMEM196Q5HYL7 178 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 CLEC20AQ6ZU45 233 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 ZBTB44Q8NCP5 570 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 FBXL13Q8NEE6 735 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 NELL1Q92832 810 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 CYFIP2Q96F07 1278 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 IER2Q9BTL4 223 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 RAB20Q9NX57 234 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 CTNND2Q9UQB3 1225 aa14.84□□□□□ -0.03
VTI1A-206ENST00000489142 EP300Q09472 2414 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 ANTXRLA6NF34 631 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 K7ESF4 209 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 TRDMT1O14717 391 aaKnown RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 SLC16A3O15427 465 aaKnown RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 CYP26A1O43174 497 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 LILRB5O75023 590 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 IRF1P10914 325 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 TCF3P15923 654 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 PPP3CCP48454 512 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 FKBP3Q00688 224 aaKnown RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 LRRC63Q05C16 580 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 ENPEPQ07075 957 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 PPP1R26Q5T8A7 1209 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 ZC3H3Q8IXZ2 948 aaKnown RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 EZH1Q92800 747 aaPredicted RBP14.83□□□□□ -0.04
VTI1A-206ENST00000489142 P2RY13Q9BPV8 354 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 CSNK1G1Q9HCP0 422 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 CISHQ9NSE2 258 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 ZNF292O60281 2723 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 GVINP1Q7Z2Y8 2422 aa14.83□□□□□ -0.04
VTI1A-206ENST00000489142 OTOGLQ3ZCN5 2332 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 EML5Q05BV3 1969 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 GPR179Q6PRD1 2367 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 HHLA1C9JL84 531 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 PSMA7O14818 248 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 STX10O60499 249 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 RNF40O75150 1001 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 CYP17A1P05093 508 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 PFKLP17858 780 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 PXNP49023 591 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 STX17P56962 302 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 MCCD1P59942 119 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 LRMPQ12912 555 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 STIM1Q13586 685 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 PPP2R5DQ14738 602 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 HECTD3Q5T447 861 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 KIAA2013Q8IYS2 634 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 NELFBQ8WX92 580 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 OVCA2Q8WZ82 227 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 CD101Q93033 1021 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 WBP2Q969T9 261 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 SLC35C1Q96A29 364 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 ZFRQ96KR1 1074 aaKnown RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 HEXIM2Q96MH2 286 aaKnown RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 DUSP9Q99956 384 aaKnown RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 IL37Q9NZH6 218 aa14.82□□□□□ -0.04
VTI1A-206ENST00000489142 ARMCX3Q9UH62 379 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 SMG5Q9UPR3 1016 aaKnown RBP14.82□□□□□ -0.04
VTI1A-206ENST00000489142 DMXL1Q9Y485 3027 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 PPP1R3GB7ZBB8 358 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 NFATC1O95644 943 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 TBX18O95935 607 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 ACO1P21399 889 aaKnown RBP14.81□□□□□ -0.04
VTI1A-206ENST00000489142 OPRD1P41143 372 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 RAD23BP54727 409 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 SEC13P55735 322 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 MORC3Q14149 939 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 GAB4Q2WGN9 574 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 CCDC40Q4G0X9 1142 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 PRR23BQ6ZRT6 265 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 SFTPA1Q8IWL2 248 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 SLC4A11Q8NBS3 891 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 DHTKD1Q96HY7 919 aaPredicted RBP14.81□□□□□ -0.04
VTI1A-206ENST00000489142 NACA2Q9H009 215 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 OSER1Q9NX31 292 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 NCDNQ9UBB6 729 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 NUDT5Q9UKK9 219 aa14.81□□□□□ -0.04
VTI1A-206ENST00000489142 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
VTI1A-206ENST00000489142 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 FAM92AA1XBS5 289 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 MDM4O15151 490 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 TLR5O60602 858 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 ZDHHC11BP0C7U3 371 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 TRIM21P19474 475 aaKnown RBP14.8□□□□□ -0.04
VTI1A-206ENST00000489142 NRLP54845 237 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 AMPD2Q01433 879 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 MESP2Q0VG99 397 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 NR1H3Q13133 447 aa14.8□□□□□ -0.04
VTI1A-206ENST00000489142 CAMK4Q16566 473 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms