RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 KRT82Q9NSB4 513 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 ADAMTS1Q9UHI8 967 aa20.42■□□□□ 0.86
CCM2-216ENST00000488727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.41■□□□□ 0.86
CCM2-216ENST00000488727 O00370 1275 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 SOX5P35711 763 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 TWF1Q12792 350 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 DDR2Q16832 855 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 SDHAF4Q5VUM1 108 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 HDXQ7Z353 690 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 SLC47A2Q86VL8 602 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 STKLD1Q8NE28 680 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
CCM2-216ENST00000488727 SMARCD1Q96GM5 515 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 APOL5Q9BWW9 433 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
CCM2-216ENST00000488727 ZDHHC7Q9NXF8 308 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 RNF14Q9UBS8 474 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 KIAA1257Q9ULG3 409 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 GREB1Q4ZG55 1949 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 PATJQ8NI35 1801 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 CCDC195A0A1B0GUA6 201 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 BEST1O76090 585 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 PAPLNO95428 1278 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 GNA15P30679 374 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 HOXA9P31269 272 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 STAT1P42224 750 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 TUFMP49411 452 aaKnown RBP20.41■□□□□ 0.86
CCM2-216ENST00000488727 ELMSAN1Q6PJG2 1045 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 VSTM1Q6UX27 236 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 TMC5Q6UXY8 1006 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 RTL10Q7L3V2 364 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 SCN4BQ8IWT1 228 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 KCNK16Q96T55 309 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 CDH22Q9UJ99 828 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 TSPAN16Q9UKR8 245 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 INTUQ9ULD6 942 aa20.41■□□□□ 0.86
CCM2-216ENST00000488727 F8VP50 259 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 H3BQ06 376 aaPredicted RBP20.4■□□□□ 0.86
CCM2-216ENST00000488727 CCL16O15467 120 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 AP1G2O75843 785 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 LRG1P02750 347 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 HNRNPA1P09651 372 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCM2-216ENST00000488727 SSTR3P32745 418 aaPredicted RBP20.4■□□□□ 0.86
CCM2-216ENST00000488727 DMTNQ08495 405 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 GOLGA7BQ2TAP0 167 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 RARS2Q5T160 578 aaKnown RBP20.4■□□□□ 0.86
CCM2-216ENST00000488727 CLEC20AQ6ZU45 233 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 VPS36Q86VN1 386 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 TTC30AQ86WT1 665 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 ZMIZ2Q8NF64 920 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 GPR152Q8TDT2 470 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 COG1Q8WTW3 980 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 ZNF606Q8WXB4 792 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 SMOQ99835 787 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 S1PR5Q9H228 398 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 NAGPAQ9UK23 515 aa20.4■□□□□ 0.86
CCM2-216ENST00000488727 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCM2-216ENST00000488727 C5orf42Q9H799 3197 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 THAP12O43422 761 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 BUB1O43683 1085 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 CFHP08603 1231 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 HOXB8P17481 243 aaPredicted RBP20.39■□□□□ 0.86
CCM2-216ENST00000488727 KCNA5P22460 613 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 GRIK1P39086 918 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 ALDH1A3P47895 512 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 CLUL1Q15846 466 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 LCLAT1Q6UWP7 414 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 CMASQ8NFW8 434 aaPredicted RBP20.39■□□□□ 0.86
CCM2-216ENST00000488727 HLA-CQ95604 372 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 PRKD2Q9BZL6 878 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 CSNK1G1Q9HCP0 422 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 PRDM6Q9NQX0 595 aa20.39■□□□□ 0.86
CCM2-216ENST00000488727 PALMO75781 387 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 FAM200BP0CF97 657 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 CYP11B1P15538 503 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 MAP3K7CLP57077 242 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 CNGA2Q16280 664 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 IFI16Q16666 785 aaKnown RBP20.39■□□□□ 0.85
CCM2-216ENST00000488727 MAP9Q49MG5 647 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 MEI1Q5TIA1 1274 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 ANKRD52Q8NB46 1076 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 GIPC2Q8TF65 315 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 PACSIN1Q9BY11 444 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 DUSP16Q9BY84 665 aa20.39■□□□□ 0.85
CCM2-216ENST00000488727 DMAP1Q9NPF5 467 aaPredicted RBP20.39■□□□□ 0.85
CCM2-216ENST00000488727 NOTCH4Q99466 2003 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 A0A0A6YYK5 440 aaPredicted RBP20.38■□□□□ 0.85
CCM2-216ENST00000488727 MICAL2O94851 1124 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 NPR3P17342 541 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 NAP1L1P55209 391 aaKnown RBP20.38■□□□□ 0.85
CCM2-216ENST00000488727 RPL10AP62906 217 aaKnown RBP20.38■□□□□ 0.85
CCM2-216ENST00000488727 C2orf54Q08AI8 447 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 PKDCCQ504Y2 493 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 CCDC70Q6NSX1 233 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 SMRP1Q8NCR6 262 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 UBA3Q8TBC4 463 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 EPS8L1Q8TE68 723 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 C8orf48Q96LL4 319 aa20.38■□□□□ 0.85
CCM2-216ENST00000488727 ZNF638Q14966 1978 aaKnown RBP20.37■□□□□ 0.85
CCM2-216ENST00000488727 CES2O00748 559 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms