RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 DNAI2Q9GZS0 605 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 ECT2Q9H8V3 914 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 CACNA1IQ9P0X4 2223 aa18.78■□□□□ 0.6
ITGB1-215ENST00000488494 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 COCHO43405 550 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 MBL2P11226 248 aaPredicted RBP18.77■□□□□ 0.6
ITGB1-215ENST00000488494 CCR3P51677 355 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 TATDN2Q93075 761 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 CCSER2Q9H7U1 834 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 METTL14Q9HCE5 456 aaKnown RBP18.77■□□□□ 0.6
ITGB1-215ENST00000488494 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 COQ4Q9Y3A0 265 aa18.77■□□□□ 0.6
ITGB1-215ENST00000488494 FAM92AA1XBS5 289 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 CYP26A1O43174 497 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 GJA4P35212 333 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 STX17P56962 302 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 SATB1Q01826 763 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 GRSF1Q12849 480 aaKnown RBP eCLIP18.76■□□□□ 0.59
ITGB1-215ENST00000488494 PAK1Q13153 545 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 CAMK4Q16566 473 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 TMEM196Q5HYL7 178 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 HECTD3Q5T447 861 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 PPP1R26Q5T8A7 1209 aaPredicted RBP18.76■□□□□ 0.59
ITGB1-215ENST00000488494 FSTL4Q6MZW2 842 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 SPEM1Q8N4L4 309 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 TTC39CQ8N584 583 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 HEXIM2Q96MH2 286 aaKnown RBP18.76■□□□□ 0.59
ITGB1-215ENST00000488494 FBXO44Q9H4M3 255 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 COMMD8Q9NX08 183 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 CHORDC1Q9UHD1 332 aaPredicted RBP18.76■□□□□ 0.59
ITGB1-215ENST00000488494 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 FANCMQ8IYD8 2048 aa18.76■□□□□ 0.59
ITGB1-215ENST00000488494 HHLA1C9JL84 531 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 NFATC1O95644 943 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 ZDHHC11BP0C7U3 371 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 TDGF1P13385 188 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 FMO5P49326 533 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 PGFP49763 221 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 TUBP50607 506 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 RAD23BP54727 409 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 AMPD2Q01433 879 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 LRMPQ12912 555 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 CUL2Q13617 745 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 PPP2R5DQ14738 602 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 FOXR2Q6PJQ5 311 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 FILIP1Q7Z7B0 1213 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 DDX42Q86XP3 938 aaKnown RBP eCLIP18.75■□□□□ 0.59
ITGB1-215ENST00000488494 SLC4A11Q8NBS3 891 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 ZFRQ96KR1 1074 aaKnown RBP18.75■□□□□ 0.59
ITGB1-215ENST00000488494 NACA2Q9H009 215 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 LINC00597Q9H2U6 94 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 SEMA4AQ9H3S1 761 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 ZSCAN32Q9NX65 697 aa18.75■□□□□ 0.59
ITGB1-215ENST00000488494 ZNF292O60281 2723 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 TRDMT1O14717 391 aaKnown RBP18.74■□□□□ 0.59
ITGB1-215ENST00000488494 LMNAP02545 664 aaKnown RBP18.74■□□□□ 0.59
ITGB1-215ENST00000488494 ACO1P21399 889 aaKnown RBP18.74■□□□□ 0.59
ITGB1-215ENST00000488494 CXCL12P48061 93 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 SNX30Q5VWJ9 437 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 MAMSTRQ6ZN01 415 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 TRIML1Q8N9V2 468 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 ATRIPQ8WXE1 791 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 NELL1Q92832 810 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 P2RY13Q9BPV8 354 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 C2orf42Q9NWW7 574 aa18.74■□□□□ 0.59
ITGB1-215ENST00000488494 MYH10P35580 1976 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 TLR5O60602 858 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 EGFP01133 1207 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 CYP17A1P05093 508 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 SYNPOQ8N3V7 929 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 ZBTB44Q8NCP5 570 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 DUSP16Q9BY84 665 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 FAM126AQ9BYI3 521 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-215ENST00000488494 FAM124BQ9H5Z6 455 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-215ENST00000488494 FBRSL1Q9HCM7 1045 aaKnown RBP18.73■□□□□ 0.59
ITGB1-215ENST00000488494 TLR8Q9NR97 1041 aaKnown RBP18.73■□□□□ 0.59
ITGB1-215ENST00000488494 KIAA1468Q9P260 1216 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 SCML2Q9UQR0 700 aa18.73■□□□□ 0.59
ITGB1-215ENST00000488494 SLC9A3R1O14745 358 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-215ENST00000488494 IRF1P10914 325 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
ITGB1-215ENST00000488494 NR1H3Q13133 447 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 GOLGA7BQ2TAP0 167 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 PKN3Q6P5Z2 889 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 KIAA1958Q8N8K9 716 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 CD101Q93033 1021 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 EXOC4Q96A65 974 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 OSER1Q9NX31 292 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 GVINP1Q7Z2Y8 2422 aa18.72■□□□□ 0.59
ITGB1-215ENST00000488494 A0A1W2PQH9 124 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 LILRB5O75023 590 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 RNF40O75150 1001 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 PAPSS2O95340 614 aaPredicted RBP18.71■□□□□ 0.59
ITGB1-215ENST00000488494 DRD1P21728 446 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 TBXAS1P24557 533 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms