RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ZSWIM1Q9BR11 485 aa15.02■□□□□ -0
COL9A2-208ENST00000488463 GMIPQ9P107 970 aa15.02■□□□□ -0
COL9A2-208ENST00000488463 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.02■□□□□ -0
COL9A2-208ENST00000488463 USP3Q9Y6I4 520 aa15.02■□□□□ -0
COL9A2-208ENST00000488463 MYOFQ9NZM1 2061 aa15.02□□□□□ -0.01
COL9A2-208ENST00000488463 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 H0Y858 1186 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 MAN2B1O00754 1011 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 COCHO43405 550 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 FGFR1OPO95684 399 aaKnown RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 ARSAP15289 507 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 TBXAS1P24557 533 aaPredicted RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 ERCC5P28715 1186 aaPredicted RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 CTHP32929 405 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 RPS9P46781 194 aaKnown RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 TUBP50607 506 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 KIF11P52732 1056 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 ZNF132P52740 706 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 GCNT1Q02742 428 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 EML3Q32P44 896 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 PKDCCQ504Y2 493 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 RAB41Q5JT25 222 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 TTC8Q8TAM2 541 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 CSGALNACT1Q8TDX6 532 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 OSCP1Q8WVF1 389 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 MSANTD3Q96H12 275 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 C8orf33Q9H7E9 229 aaPredicted RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 CCSER2Q9H7U1 834 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
COL9A2-208ENST00000488463 OSER1Q9NX31 292 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 CNTN6Q9UQ52 1028 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 SCML2Q9UQR0 700 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 OTOGLQ3ZCN5 2332 aa15.01□□□□□ -0.01
COL9A2-208ENST00000488463 SPTBN4Q9H254 2564 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 LEFTY2O00292 366 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 TULP2O00295 520 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 CHRNB1P11230 501 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 PDE6CP51160 858 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 RUNX3Q13761 415 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 ANGPT1Q15389 498 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 ITPRIPL2Q3MIP1 535 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 DPY19L2P1Q6NXN4 242 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 RRAGAQ7L523 313 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 SCD5Q86SK9 330 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 RALGPS2Q86X27 583 aaPredicted RBP15□□□□□ -0.01
COL9A2-208ENST00000488463 KIAA1958Q8N8K9 716 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 FAM3CQ92520 227 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 UBXN6Q9BZV1 441 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 INTS2Q9H0H0 1204 aaKnown RBP15□□□□□ -0.01
COL9A2-208ENST00000488463 LINC00597Q9H2U6 94 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 FBXO44Q9H4M3 255 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 EBF3Q9H4W6 596 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 THAP9Q9H5L6 903 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 NMUR1Q9HB89 426 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 CPQQ9Y646 472 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 WNT6Q9Y6F9 365 aa15□□□□□ -0.01
COL9A2-208ENST00000488463 O00370 1275 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 CYP26A1O43174 497 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 RFX1P22670 979 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 YWHAEP62258 255 aaKnown RBP14.99□□□□□ -0.01
COL9A2-208ENST00000488463 GAS6Q14393 721 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 PDGFRLQ15198 375 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 GAB4Q2WGN9 574 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
COL9A2-208ENST00000488463 MIIPQ5JXC2 388 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 HECTD3Q5T447 861 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 BHLHA9Q7RTU4 235 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 C1orf210Q8IVY1 113 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 PPM1KQ8N3J5 372 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 WBP2Q969T9 261 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 JAKMIP2Q96AA8 810 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 CYLDQ9NQC7 956 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 TSPAN16Q9UKR8 245 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 NDRG2Q9UN36 371 aaKnown RBP14.99□□□□□ -0.01
COL9A2-208ENST00000488463 MRPS17Q9Y2R5 130 aaKnown RBP14.99□□□□□ -0.01
COL9A2-208ENST00000488463 PTPRZ1P23471 2315 aaPredicted RBP14.99□□□□□ -0.01
COL9A2-208ENST00000488463 ATG2BQ96BY7 2078 aa14.99□□□□□ -0.01
COL9A2-208ENST00000488463 GREM1O60565 184 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 GABBR2O75899 941 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 TBX18O95935 607 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 ABL1P00519 1130 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 CALCAP01258 141 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 PAEPP09466 180 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 VDRP11473 427 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 TRIM21P19474 475 aaKnown RBP14.98□□□□□ -0.01
COL9A2-208ENST00000488463 MAGEA9P43362 315 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 KPNA1P52294 538 aaPredicted RBP14.98□□□□□ -0.01
COL9A2-208ENST00000488463 APBA1Q02410 837 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 PDE4CQ08493 712 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 CETN1Q12798 172 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 CCINQ13939 588 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 SGO2Q562F6 1265 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 NAIF1Q69YI7 327 aaPredicted RBP14.98□□□□□ -0.01
COL9A2-208ENST00000488463 TRIM65Q6PJ69 517 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 LCLAT1Q6UWP7 414 aa14.98□□□□□ -0.01
COL9A2-208ENST00000488463 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms