RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NMT1P30419 496 aaKnown RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 ETFBP38117 255 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 TNFSF9P41273 254 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 MATR3P43243 847 aaKnown RBP eCLIP6.45□□□□□ -1.382e-6■■■■□ 20.9
CDHR3-213ENST00000488386 MCM2P49736 904 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 CDR1P51861 262 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 NTHL1P78549 312 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 ZXDAP98168 799 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 DSG1Q02413 1049 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 DMP1Q13316 513 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 BMS1Q14692 1282 aaKnown RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PLCL1Q15111 1095 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PTPAQ15257 358 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PCBP1Q15365 356 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 HERC4Q5GLZ8 1057 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 ZBTB41Q5SVQ8 909 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 AXDND1Q5T1B0 1012 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 FAM171A1Q5VUB5 890 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 CES5AQ6NT32 575 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 RSPO2Q6UXX9 243 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 TSPYL5Q86VY4 417 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 GPBP1Q86WP2 473 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 SYT2Q8N9I0 419 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 C19orf47Q8N9M1 422 aaKnown RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 RASSF8Q8NHQ8 419 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 EDAQ92838 391 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 C18orf25Q96B23 403 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 REEP2Q9BRK0 252 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 TCHPQ9BT92 498 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 HDAC8Q9BY41 377 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 MRPL4Q9BYD3 311 aaKnown RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PANK2Q9BZ23 570 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PRDM14Q9GZV8 571 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 ZHX3Q9H4I2 956 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 PTPRHQ9HD43 1115 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 MBNL3Q9NUK0 354 aaKnown RBP6.45□□□□□ -1.38
CDHR3-213ENST00000488386 ARHGAP28Q9P2N2 729 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 TNFSF13BQ9Y275 285 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 IRAK3Q9Y616 596 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
CDHR3-213ENST00000488386 BDP1A6H8Y1 2624 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 SMIM28A0A1B0GU29 152 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 CCDC195A0A1B0GUA6 201 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TMEM221A6NGB7 291 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 K7ENM7 598 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 M0R296 226 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 NARSO43776 548 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 GLUD1P00367 558 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TP53P04637 393 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 KRT18P05783 430 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 CXCL8P10145 99 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 PLS3P13797 630 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 HOXB8P17481 243 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TKTP29401 623 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 UBA7P41226 1012 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 EFNA5P52803 228 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 VCPP55072 806 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 ITIH3Q06033 890 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 GIT2Q14161 759 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 PSMD5Q16401 504 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 PPP2R5EQ16537 467 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 USP41Q3LFD5 358 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 DCAF4L1Q3SXM0 396 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 ZC2HC1CQ53FD0 456 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 ATAT1Q5SQI0 421 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 HYIQ5T013 277 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 MPZL3Q6UWV2 235 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 GPR149Q86SP6 731 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 MYCT1Q8N699 235 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TDRD5Q8NAT2 981 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 KREMEN2Q8NCW0 462 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TMEM161BQ8NDZ6 487 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 LNX1Q8TBB1 728 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 RSAD2Q8WXG1 361 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 KLHL6Q8WZ60 621 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 RAD54LQ92698 747 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 STAMQ92783 540 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 CHAMP1Q96JM3 812 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 FAM84AQ96KN4 292 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 SNX27Q96L92 541 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 DRC1Q96MC2 740 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 RIPOR3Q96MK2 946 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 PPP1R10Q96QC0 940 aaKnown RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 USP28Q96RU2 1077 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 CLSTN3Q9BQT9 956 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 SFXN1Q9H9B4 322 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 RXFP1Q9HBX9 757 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 CHST7Q9NS84 486 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TBC1D7Q9P0N9 293 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 TUBGCP4Q9UGJ1 667 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 ADGRE2Q9UHX3 823 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 FBXO2Q9UK22 296 aaPredicted RBP6.44□□□□□ -1.38
CDHR3-213ENST00000488386 MTMR6Q9Y217 621 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 ANK1P16157 1881 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 KMT2EQ8IZD2 1858 aa6.44□□□□□ -1.38
CDHR3-213ENST00000488386 A0A087X0B3 334 aa6.43□□□□□ -1.38
CDHR3-213ENST00000488386 FSD2A1L4K1 749 aa6.43□□□□□ -1.38
CDHR3-213ENST00000488386 ANKRD63C9JTQ0 380 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms