RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 BOP1Q14137 746 aaKnown RBP4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 STARD3Q14849 445 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 PLA1AQ53H76 456 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 RUSC1-AS1Q66K80 236 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 ZDHHC24Q6UX98 284 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 CLNKQ7Z7G1 428 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 SYTL1Q8IYJ3 562 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF566Q969W8 418 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 LRIG1Q96JA1 1093 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 PPP1R9BQ96SB3 815 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 TTLL2Q9BWV7 592 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 XPNPEP3Q9NQH7 507 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 GJB4Q9NTQ9 266 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 MID2Q9UJV3 735 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 ST3GAL5Q9UNP4 418 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 SHOC2Q9UQ13 582 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 BTBD3Q9Y2F9 522 aa4.23□□□□□ -1.73
SNRNP27-204ENST00000487029 A0A087WV62 115 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 PRAMEF33A0A0G2JMD5 474 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 A0A1W2PS29 197 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 TOR1BO14657 336 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 PLA2G6O60733 806 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 PRAMEF10O60809 474 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 SUN1O94901 812 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 BTF3P20290 206 aaKnown RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ACVR2AP27037 513 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 LRPAP1P30533 357 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 CCKBRP32239 447 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ANXA11P50995 505 aaKnown RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 MC2RQ01718 297 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ARHGEF7Q14155 803 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 SLC29A2Q14542 456 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ZRSR2Q15696 482 aaKnown RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 INSCQ1MX18 579 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 MGAT5BQ3V5L5 792 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 RRAGBQ5VZM2 374 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ANO1Q5XXA6 986 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 PGBD2Q6P3X8 592 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 TMPRSS9Q7Z410 1059 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 FBXL20Q96IG2 436 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 STK33Q9BYT3 514 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 DHX36Q9H2U1 1008 aaKnown RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 SMOC2Q9H3U7 446 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 PPCSQ9HAB8 311 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 TBC1D23Q9NUY8 699 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 MAN2B2Q9Y2E5 1009 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 WNT6Q9Y6F9 365 aa4.22□□□□□ -1.73
SNRNP27-204ENST00000487029 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.73
SNRNP27-204ENST00000487029 LINC00473A8K010 186 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ADM5C9JUS6 153 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 RAB27BO00194 218 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 HNRNPDLO14979 420 aaKnown RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 A1BGP04217 495 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ITGALP20701 1170 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 KELP23276 732 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 PXNP49023 591 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 CPT1AP50416 773 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF134P52741 427 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 LILRA4P59901 499 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 RPS7P62081 194 aaKnown RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 KRT17Q04695 432 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ICA1Q05084 483 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 DYRK1AQ13627 763 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 TRIM14Q14142 442 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 PDCD2Q16342 344 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 PREPLQ4J6C6 727 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 TMEM108Q6UXF1 575 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 KRT28Q7Z3Y7 464 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF527Q8NB42 609 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 CCDC150Q8NCX0 1101 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 SEMA6DQ8NFY4 1073 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 CYP2W1Q8TAV3 490 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 SMCR8Q8TEV9 937 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 LPIN2Q92539 896 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 RPL36ALQ969Q0 106 aaKnown RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 LRRC46Q96FV0 321 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 GDF15Q99988 308 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ADGRE3Q9BY15 652 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 MAGEB5Q9BZ81 275 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 HEYLQ9NQ87 328 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 TM7SF3Q9NS93 570 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 ZNF580Q9UK33 172 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 CAPN11Q9UMQ6 739 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 MAGED2Q9UNF1 606 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 TBC1D30Q9Y2I9 924 aa4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNRNP27-204ENST00000487029 LINC01548A6NM66 108 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 H7C4K7 107 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 FFAR2O15552 330 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 PROM1O43490 865 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 MOSPD3O75425 235 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 LATS1O95835 1130 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 SRGNP10124 158 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 TPH1P17752 444 aa4.2□□□□□ -1.74
SNRNP27-204ENST00000487029 GATA3P23771 443 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms