RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SCAND2PQ9GZW5 306 aaPredicted RBP26.04■■□□□ 1.76
LIME1-206ENST00000487026 KRT82Q9NSB4 513 aa26.04■■□□□ 1.76
LIME1-206ENST00000487026 CDV3Q9UKY7 258 aaKnown RBP26.04■■□□□ 1.76
LIME1-206ENST00000487026 COCHO43405 550 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 KIF20AO95235 890 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 ASPAP45381 313 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 SLC6A11P48066 632 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 GCLMP48507 274 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 DHCR24Q15392 516 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 KBTBD6Q86V97 674 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 CRYBG2Q8N1P7 616 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 CAMKK1Q8N5S9 505 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 PDZD8Q8NEN9 1154 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 ZMIZ2Q8NF64 920 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 TAF4BQ92750 862 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 CCSER2Q9H7U1 834 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 FAM49BQ9NUQ9 324 aa26.03■■□□□ 1.76
LIME1-206ENST00000487026 CCDC163A0A0D9SF12 145 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 A0A1W2PQ27 194 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 A0A1W2PQ64 194 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 A0A1W2PQD8 194 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 K7EQS6 105 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 LRP3O75074 770 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 ZNF202O95125 648 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 CCDC192P0DO97 292 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 SDHBP21912 280 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 PGFP49763 221 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 PPP3CAQ08209 521 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 DMC1Q14565 340 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 C2orf27AQ580R0 203 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 HECTD3Q5T447 861 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 SYT13Q7L8C5 426 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 OVCA2Q8WZ82 227 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 MMRN2Q9H8L6 949 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 IL37Q9NZH6 218 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 GMIPQ9P107 970 aa26.02■■□□□ 1.76
LIME1-206ENST00000487026 DCDC2BA2VCK2 349 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 SLC9A3R1O14745 358 aaPredicted RBP26.01■■□□□ 1.75
LIME1-206ENST00000487026 ADORA2BP29275 332 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 MAP3K7CLP57077 242 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 CCDC6Q16204 474 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 CSRP2Q16527 193 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 RHBDF2Q6PJF5 856 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 PRR23CQ6ZRP0 262 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 CACNA2D4Q7Z3S7 1137 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 SFTPA1Q8IWL2 248 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 FAM186BQ8IYM0 893 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 TAS1R2Q8TE23 839 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 TWNKQ96RR1 684 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 ARRDC1-AS1Q9H2J1 176 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 APOBEC3GQ9HC16 384 aaKnown RBP26.01■■□□□ 1.75
LIME1-206ENST00000487026 ATP6V1DQ9Y5K8 247 aa26.01■■□□□ 1.75
LIME1-206ENST00000487026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26■■□□□ 1.75
LIME1-206ENST00000487026 MAPK13O15264 365 aa26■■□□□ 1.75
LIME1-206ENST00000487026 GDF9O60383 454 aa26■■□□□ 1.75
LIME1-206ENST00000487026 MESP2Q0VG99 397 aa26■■□□□ 1.75
LIME1-206ENST00000487026 ADAM9Q13443 819 aa26■■□□□ 1.75
LIME1-206ENST00000487026 UNC93AQ86WB7 457 aa26■■□□□ 1.75
LIME1-206ENST00000487026 GUF1Q8N442 669 aaKnown RBP26■■□□□ 1.75
LIME1-206ENST00000487026 USP33Q8TEY7 942 aa26■■□□□ 1.75
LIME1-206ENST00000487026 WBP2Q969T9 261 aa26■■□□□ 1.75
LIME1-206ENST00000487026 ACDQ96AP0 544 aa26■■□□□ 1.75
LIME1-206ENST00000487026 ZFRQ96KR1 1074 aaKnown RBP26■■□□□ 1.75
LIME1-206ENST00000487026 RALGAPA1Q6GYQ0 2036 aa26■■□□□ 1.75
LIME1-206ENST00000487026 NFIL3Q16649 462 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 SNX30Q5VWJ9 437 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 INTS8Q75QN2 995 aaKnown RBP25.99■■□□□ 1.75
LIME1-206ENST00000487026 DDX42Q86XP3 938 aaKnown RBP eCLIP25.99■■□□□ 1.75
LIME1-206ENST00000487026 SMYD4Q8IYR2 804 aaPredicted RBP25.99■■□□□ 1.75
LIME1-206ENST00000487026 CCDC33Q8N5R6 958 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 JAKMIP2Q96AA8 810 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 EEF2KMTQ96G04 330 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 NCOR2Q9Y618 2525 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 MYO16Q9Y6X6 1858 aa25.99■■□□□ 1.75
LIME1-206ENST00000487026 FAM92AA1XBS5 289 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 DCLK1O15075 740 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 APBB3O95704 486 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 ZDHHC11BP0C7U3 371 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 KRT13P13646 458 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 PSMC2P35998 433 aaKnown RBP25.98■■□□□ 1.75
LIME1-206ENST00000487026 C12orf40Q86WS4 652 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 KIAA1958Q8N8K9 716 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 CSNK1G1Q9HCP0 422 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 COMMD8Q9NX08 183 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 MYOFQ9NZM1 2061 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 SPTBN2O15020 2390 aa25.98■■□□□ 1.75
LIME1-206ENST00000487026 EML5Q05BV3 1969 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 E2F8A0AVK6 867 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 IRF1P10914 325 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 CD58P19256 250 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 RPL13P26373 211 aaKnown RBP25.97■■□□□ 1.75
LIME1-206ENST00000487026 SF3A2Q15428 464 aaKnown RBP25.97■■□□□ 1.75
LIME1-206ENST00000487026 LY6G5CQ5SRR4 150 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 GPRIN1Q7Z2K8 1008 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 PNKPQ96T60 521 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 RTKNQ9BST9 563 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 IMPG2Q9BZV3 1241 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 TBC1D14Q9P2M4 693 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 INVSQ9Y283 1065 aa25.97■■□□□ 1.75
LIME1-206ENST00000487026 SH3BP1Q9Y3L3 701 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms