RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KIF11P52732 1056 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 SLC7A9P82251 487 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 APBA1Q02410 837 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 BST2Q10589 180 aaKnown RBP19.2■□□□□ 0.66
COL1A1-207ENST00000486572 USP4Q13107 963 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 STILQ15468 1287 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 ZNF77Q15935 545 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 TPRG1Q6ZUI0 275 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 PIGZQ86VD9 579 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 RIN3Q8TB24 985 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 CSGALNACT1Q8TDX6 532 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 TFAP2BQ92481 460 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 ZFYVE19Q96K21 471 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 NAT10Q9H0A0 1025 aaKnown RBP19.2■□□□□ 0.66
COL1A1-207ENST00000486572 TLR8Q9NR97 1041 aaKnown RBP19.2■□□□□ 0.66
COL1A1-207ENST00000486572 TAB2Q9NYJ8 693 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 COL4A3Q01955 1670 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 XPO1O14980 1071 aaKnown RBP19.19■□□□□ 0.66
COL1A1-207ENST00000486572 CYP26A1O43174 497 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 TPM2P07951 284 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 SETSIPP0DME0 302 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 TCF3P15923 654 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 BRD2P25440 801 aaKnown RBP19.19■□□□□ 0.66
COL1A1-207ENST00000486572 PDE4CQ08493 712 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 MTF1Q14872 753 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 KRT31Q15323 416 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 ANO6Q4KMQ2 910 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 HECTD3Q5T447 861 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 CC2D1AQ6P1N0 951 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-207ENST00000486572 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 TMEM105Q8N8V8 129 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 SH3RF2Q8TEC5 729 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 DDX23Q9BUQ8 820 aaKnown RBP19.19■□□□□ 0.66
COL1A1-207ENST00000486572 RNF38Q9H0F5 515 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 SIX2Q9NPC8 291 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL1A1-207ENST00000486572 PIAS3Q9Y6X2 628 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 ZNF318Q5VUA4 2279 aa19.19■□□□□ 0.66
COL1A1-207ENST00000486572 KANSL1LA0AUZ9 987 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 COCHO43405 550 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 LETM1O95202 739 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-207ENST00000486572 MBL2P11226 248 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-207ENST00000486572 CNGA2Q16280 664 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 ARHGAP44Q17R89 818 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 RAB41Q5JT25 222 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 CCDC186Q7Z3E2 898 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 ANKRD20A12PQ8NF67 263 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 FAM83CQ9BQN1 747 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 ZSWIM1Q9BR11 485 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 CCSER2Q9H7U1 834 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 GKN1Q9NS71 199 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 CPQQ9Y646 472 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 USP3Q9Y6I4 520 aa19.18■□□□□ 0.66
COL1A1-207ENST00000486572 M0QYV0 167 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 LEFTY2O00292 366 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 TULP2O00295 520 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 CALCAP01258 141 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 GLULP15104 373 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 PLA2G4AP47712 749 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 PGFP49763 221 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 MLLT6P55198 1093 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-207ENST00000486572 TNK2Q07912 1038 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 PKDCCQ504Y2 493 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 SMYD5Q6GMV2 418 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 ZNF852Q6ZMS4 543 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 AOPEPQ8N6M6 819 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 PJA1Q8NG27 643 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 UBA3Q8TBC4 463 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 SHC3Q92529 594 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 MSANTD3Q96H12 275 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 BPIFA3Q9BQP9 254 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 FOXQ1Q9C009 403 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 NACA2Q9H009 215 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 VPS16Q9H269 839 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 CYLDQ9NQC7 956 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 SMPD4Q9NXE4 827 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 GTSE1Q9NYZ3 720 aa19.17■□□□□ 0.66
COL1A1-207ENST00000486572 BECN2A8MW95 431 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 MAN2B1O00754 1011 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 PI15O43692 258 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 TLR5O60602 858 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 CD72P21854 359 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 USP8P40818 1118 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 PSEN1P49768 467 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 TKTL1P51854 596 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 KPNA1P52294 538 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-207ENST00000486572 ZXDBP98169 803 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 KCNMA1Q12791 1236 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 UBXN2BQ14CS0 331 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 NCAPHQ15003 741 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 PDGFRLQ15198 375 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 ITPRIPL2Q3MIP1 535 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 DDX42Q86XP3 938 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL1A1-207ENST00000486572 OSCP1Q8WVF1 389 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 C8orf33Q9H7E9 229 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-207ENST00000486572 NMUR1Q9HB89 426 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 LRRC4Q9HBW1 653 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 LTB4R2Q9NPC1 389 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 OSER1Q9NX31 292 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms