RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 SMTNL1A8MU46 457 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 O00370 1275 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
HMG20B-211ENST00000486028 USP8P40818 1118 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 CLCN5P51795 746 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 KIF11P52732 1056 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 ZNF132P52740 706 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 PRKCQQ04759 706 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 BST2Q10589 180 aaKnown RBP13.13□□□□□ -0.31
HMG20B-211ENST00000486028 MLF2Q15773 248 aaPredicted RBP13.13□□□□□ -0.31
HMG20B-211ENST00000486028 ARHGAP44Q17R89 818 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 HECTD3Q5T447 861 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
HMG20B-211ENST00000486028 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 CSGALNACT1Q8TDX6 532 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 SLC22A12Q96S37 553 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 VPS16Q9H269 839 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 CCL26Q9Y258 94 aa13.13□□□□□ -0.31
HMG20B-211ENST00000486028 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
HMG20B-211ENST00000486028 MED7O43513 233 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 OAS1P00973 400 aaKnown RBP13.12□□□□□ -0.31
HMG20B-211ENST00000486028 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 SETSIPP0DME0 302 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 GLULP15104 373 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 TUBP50607 506 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 SLC7A9P82251 487 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 PDE4CQ08493 712 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 NCAPHQ15003 741 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-211ENST00000486028 PIGZQ86VD9 579 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 TTC30AQ86WT1 665 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 UBA3Q8TBC4 463 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 SIX2Q9NPC8 291 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
HMG20B-211ENST00000486028 DNAJC12Q9UKB3 198 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
HMG20B-211ENST00000486028 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 MYH10P35580 1976 aa13.12□□□□□ -0.31
HMG20B-211ENST00000486028 SYCE3A1L190 88 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 LRRC10BA6NIK2 292 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 COCHO43405 550 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 OLFM2O95897 454 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 TCF3P15923 654 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ZNF18P17022 549 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ZNF165P49910 485 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 STARD6P59095 220 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 APBA1Q02410 837 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 PDGFRLQ15198 375 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 CCDC186Q7Z3E2 898 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 DDX42Q86XP3 938 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 SHC3Q92529 594 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 LSM14BQ9BX40 385 aaKnown RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 NACA2Q9H009 215 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
HMG20B-211ENST00000486028 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-211ENST00000486028 DENND4CQ5VZ89 1909 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 BECN2A8MW95 431 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 M0QYV0 167 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 LEFTY2O00292 366 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 ARNTLO00327 626 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 CYP26A1O43174 497 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 TLR5O60602 858 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 ZBED1O96006 694 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 CALCAP01258 141 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 AVPR2P30518 371 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 GNA15P30679 374 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 TKTL1P51854 596 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
HMG20B-211ENST00000486028 PTK2Q05397 1052 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 MTF1Q14872 753 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 ZNF77Q15935 545 aa13.1□□□□□ -0.31
HMG20B-211ENST00000486028 RAB41Q5JT25 222 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms