RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 ACOT1Q86TX2 421 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 FAM35AQ86V20 835 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 ADGRG2Q8IZP9 1017 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 FUKQ8N0W3 1084 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 SPEM1Q8N4L4 309 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 TRIML1Q8N9V2 468 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 ZBTB44Q8NCP5 570 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 CCDC150Q8NCX0 1101 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 TAS1R2Q8TE23 839 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 WHAMMQ8TF30 809 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 OSCP1Q8WVF1 389 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 EXOC4Q96A65 974 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 SMARCD1Q96GM5 515 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 SLITRK1Q96PX8 696 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 CYP2S1Q96SQ9 504 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 NIF3L1Q9GZT8 377 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 FBXO44Q9H4M3 255 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 LMAN1LQ9HAT1 526 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 APOBEC3GQ9HC16 384 aaKnown RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 DMAP1Q9NPF5 467 aaPredicted RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 TMEM30AQ9NV96 361 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 CCL26Q9Y258 94 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 PATJQ8NI35 1801 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 ZNF292O60281 2723 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 GPR179Q6PRD1 2367 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SPTBN4Q9H254 2564 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SPAG17Q6Q759 2223 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 BICDL2A1A5D9 508 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 C2orf78A6NCI8 922 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 HHLA1C9JL84 531 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SPECC1L-ADORA2AF8WAN1 911 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CLDN5O00501 218 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 LILRB5O75023 590 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 GADD45BO75293 160 aaPredicted RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 LRRN2O75325 713 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 GNA14O95837 355 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 BMP6P22004 513 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CTHP32929 405 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 PIK3CAP42336 1068 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 MXI1P50539 228 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CDR1P51861 262 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 KPNA1P52294 538 aaPredicted RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 CACNA2D1P54289 1103 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 TAF10Q12962 218 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 USP4Q13107 963 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 NR1H3Q13133 447 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CCINQ13939 588 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 LRRC32Q14392 662 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 PPP2R5DQ14738 602 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 FBXO43Q4G163 708 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 TMEM196Q5HYL7 178 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 TTI2Q6NXR4 508 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 ZC3H14Q6PJT7 736 aaKnown RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 DDX42Q86XP3 938 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS50-218ENST00000485994 ARL14EPQ8N8R7 260 aaPredicted RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 STKLD1Q8NE28 680 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 ZMIZ2Q8NF64 920 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SEMA4DQ92854 862 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SLC35C1Q96A29 364 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 OTUB2Q96DC9 234 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SLC22A12Q96S37 553 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 KCNK16Q96T55 309 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 SMOQ99835 787 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 DUSP16Q9BY84 665 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 ZNF518BQ9C0D4 1074 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 RNF38Q9H0F5 515 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 ECT2Q9H8V3 914 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 HPS4Q9NQG7 708 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 PRMT8Q9NR22 394 aaPredicted RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 GTSE1Q9NYZ3 720 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 ARMCX3Q9UH62 379 aaPredicted RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 MAN1B1Q9UKM7 699 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 KIAA1257Q9ULG3 409 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 PCDHGA2Q9Y5H1 932 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 HELZP42694 1942 aaKnown RBP7.42□□□□□ -1.22
VPS50-218ENST00000485994 SDK1Q7Z5N4 2213 aa7.42□□□□□ -1.22
VPS50-218ENST00000485994 CCDC163A0A0D9SF12 145 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 E2F8A0AVK6 867 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 CHURC1-FNTBB4DL54 471 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 SLC9A3R1O14745 358 aaPredicted RBP7.41□□□□□ -1.22
VPS50-218ENST00000485994 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 AP1G2O75843 785 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 BEST1O76090 585 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
VPS50-218ENST00000485994 LMNAP02545 664 aaKnown RBP7.41□□□□□ -1.22
VPS50-218ENST00000485994 TRIM49P0CI25 452 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 TRIM49CP0CI26 452 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 TDGF1P13385 188 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 DRD1P21728 446 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 TBXAS1P24557 533 aaPredicted RBP7.41□□□□□ -1.22
VPS50-218ENST00000485994 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 CXCL12P48061 93 aa7.41□□□□□ -1.22
VPS50-218ENST00000485994 CCR3P51677 355 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms