RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 FGBP02675 491 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 KRT1P04264 644 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 KRT7P08729 469 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 RHOXF2BP0C7M4 288 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 PYGMP11217 842 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 ITGB8P26012 769 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 GRIK1P39086 918 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 MARCKSL1P49006 195 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 RPL34P49207 117 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 TKTL1P51854 596 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CDR1P51861 262 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TAS2R40P59535 323 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 WDR5P61964 334 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 MRPS5P82675 430 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 OGDHQ02218 1023 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 FPGSQ05932 587 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CAMK2BQ13554 666 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CDO1Q16878 200 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CCDC142Q17RM4 750 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 GLE1Q53GS7 698 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 KIAA1841Q6NSI8 718 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 C8orf74Q6P047 294 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 ANKS3Q6ZW76 656 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CMTR2Q8IYT2 770 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 KATNAL2Q8IYT4 538 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 RCOR2Q8IZ40 523 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 NOA1Q8NC60 698 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 OR10T2Q8NGX3 314 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 EXD1Q8NHP7 514 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TSC1Q92574 1164 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 ZNF558Q96NG5 402 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TMEM209Q96SK2 561 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 SMOQ99835 787 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 RHOXF2Q9BQY4 288 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 AP1M1Q9BXS5 423 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 GPR62Q9BZJ7 368 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 ZCWPW1Q9H0M4 648 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 CNGB3Q9NQW8 809 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 RBM12Q9NTZ6 932 aaKnown RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 MARCH5Q9NX47 278 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 ABI2Q9NYB9 513 aaPredicted RBP9.99□□□□□ -0.81
CTSA-208ENST00000485627 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTSA-208ENST00000485627 TMEM59LQ9UK28 342 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 PCDHB5Q9Y5E4 795 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TET1Q8NFU7 2136 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 DPYSL4O14531 572 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CAPN9O14815 690 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 TRIM66O15016 1216 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 PRPSAP2O60256 369 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ZMYND10O75800 440 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 BEST1O76090 585 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ZBED1O96006 694 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 GLI1P08151 1106 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CPB1P15086 417 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 LAG3P18627 525 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 FGFR3P22607 806 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 PCK1P35558 622 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 PBX3P40426 434 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ARPP19P56211 112 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 COPS2P61201 443 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 DEFB103AP81534 67 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ATP11AP98196 1134 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ZNF252P-AS1Q0IIN9 211 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 SMARCB1Q12824 385 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 USP41Q3LFD5 358 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 DAB2IPQ5VWQ8 1189 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 SCYL2Q6P3W7 929 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 KCNT2Q6UVM3 1135 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ARCQ7LC44 396 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 OTOP2Q7RTS6 562 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 MAATS1Q7Z4T9 603 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 POLNQ7Z5Q5 900 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ADAT2Q7Z6V5 191 aaKnown RBP9.98□□□□□ -0.81
CTSA-208ENST00000485627 LRRTM3Q86VH5 581 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 SLC13A5Q86YT5 568 aaPredicted RBP9.98□□□□□ -0.81
CTSA-208ENST00000485627 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 KLHL7Q8IXQ5 586 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CLEC4CQ8WTT0 213 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 TMEM169Q96HH4 297 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 FUBP3Q96I24 572 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTSA-208ENST00000485627 IGSF21Q96ID5 467 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 KCNK16Q96T55 309 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 KRT12Q99456 494 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 PKMYT1Q99640 499 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ZBED2Q9BTP6 218 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 TRIM62Q9BVG3 475 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ULBP1Q9BZM6 244 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CWH43Q9H720 699 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 ZWILCHQ9H900 591 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 CSNK1G1Q9HCP0 422 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 PNPLA8Q9NP80 782 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 NGRNQ9NPE2 291 aaKnown RBP9.98□□□□□ -0.81
CTSA-208ENST00000485627 AAASQ9NRG9 546 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
CTSA-208ENST00000485627 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms